Gene EcDH1_3278 details

Gene Information

• Locus tag: EcDH1_3278
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 3524618
• End bp: 3525289
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 49%
• Product: homoserine/threonine efflux pump
• Protein accession: ACX40902
• Protein GI: 260450480

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCAGT TAGTTCACTT ATTTATGGAT GAAATCACTA TGGATCCTTT GCATGCCGTT 
TACCTGACCG TAGGACTGTT CGTGATTACT TTTTTTAATC CGGGAGCCAA TCTCTTTGTG 
GTAGTACAAA CCAGCCTGGC TTCCGGTCGA CGCGCAGGGG TGCTGACCGG GCTGGGCGTG 
GCGCTGGGCG ATGCATTTTA TTCCGGGTTG GGTTTGTTTG GTCTTGCAAC GCTAATTACG 
CAGTGTGAGG AGATTTTTTC GCTTATCAGA ATCGTCGGCG GCGCTTATCT CTTATGGTTT 
GCGTGGTGCA GCATGCGCCG CCAGTCAACA CCGCAAATGA GCACACTACA ACAACCGATT 
AGCGCCCCCT GGTATGTCTT TTTTCGCCGC GGATTAATTA CCGATCTCTC TAACCCGCAA 
ACCGTTTTAT TTTTTATCAG TATTTTCTCA GTAACATTAA ATGCCGAAAC ACCAACATGG 
GCACGTTTAA TGGCCTGGGC GGGGATTGTG CTCGCATCAA TTATCTGGCG AGTTTTTCTT 
AGTCAGGCGT TTTCTTTGCC CGCTGTGCGT CGTGCTTATG GGCGTATGCA ACGCGTTGCC 
AGTCGGGTTA TTGGTGCAAT TATTGGTGTA TTCGCGCTAC GCCTGATTTA CGAAGGGGTG 
ACGCAGCGGT GA 

 

Protein sequence

MMQLVHLFMD EITMDPLHAV YLTVGLFVIT FFNPGANLFV VVQTSLASGR RAGVLTGLGV 
ALGDAFYSGL GLFGLATLIT QCEEIFSLIR IVGGAYLLWF AWCSMRRQST PQMSTLQQPI 
SAPWYVFFRR GLITDLSNPQ TVLFFISIFS VTLNAETPTW ARLMAWAGIV LASIIWRVFL 
SQAFSLPAVR RAYGRMQRVA SRVIGAIIGV FALRLIYEGV TQR