Gene EcDH1_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3256 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3498031 
End bp3498840 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content55% 
IMG OID 
Product4-oxalocrotonate decarboxylase 
Protein accessionACX40880 
Protein GI260450458 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGC ATACTCTTGA GCAACTGGCG GCGGATTTAC GCCGCGCCGC AGAGCAGGGC 
GAAGCGATTG CACCGCTGCG CGATCTGATT GGTATCGATA ACGCTGAAGC GGCTTACGCC
ATTCAGCACA TAAATGTGCA ACATGACGTT GCGCAGGGGC GTCGCGTGGT AGGGCGTAAA
GTGGGCCTGA CACATCCGAA AGTGCAACAA CAACTGGGCG TTGATCAACC GGATTTTGGG
ACGTTATTTG CCGACATGTG TTATGGCGAT AACGAAATCA TTCCTTTTTC CCGTGTTCTG
CAACCCCGCA TTGAAGCGGA GATCGCACTG GTGTTGAACC GCGATTTGCC CGCAACCGAT
ATCACCTTCG ACGAATTGTA TAACGCCATT GAATGGGTAC TTCCGGCGCT GGAAGTGGTG
GGGAGCCGCA TTCGCGACTG GTCGATTCAG TTTGTCGATA CCGTGGCAGA TAACGCCTCC
TGTGGGGTGT ATGTCATCGG CGGTCCGGCG CAACGTCCGG CGGGGTTAGA CCTGAAAAAC
TGCGCCATGA AGATGACGCG TAATAACGAA GAGGTTTCTA GCGGGCGCGG CAGCGAATGC
CTGGGACATC CGCTTAATGC GGCCGTCTGG CTGGCACGCA AAATGGCCAG TCTGGGTGAA
CCGCTGCGCA CCGGAGATAT CATTCTTACC GGGGCATTAG GTCCGATGGT GGCGGTGAAT
GCGGGCGATC GTTTTGAAGC CCATATTGAA GGCATAGGTT CAGTTGCTGC GACATTTTCA
AGCGCAGCCC CAAAAGGAAG TCTGTCATGA
 
Protein sequence
MTKHTLEQLA ADLRRAAEQG EAIAPLRDLI GIDNAEAAYA IQHINVQHDV AQGRRVVGRK 
VGLTHPKVQQ QLGVDQPDFG TLFADMCYGD NEIIPFSRVL QPRIEAEIAL VLNRDLPATD
ITFDELYNAI EWVLPALEVV GSRIRDWSIQ FVDTVADNAS CGVYVIGGPA QRPAGLDLKN
CAMKMTRNNE EVSSGRGSEC LGHPLNAAVW LARKMASLGE PLRTGDIILT GALGPMVAVN
AGDRFEAHIE GIGSVAATFS SAAPKGSLS