Gene EcDH1_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3254 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3496074 
End bp3497087 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content57% 
IMG OID 
Product4-hydroxy-2-oxovalerate aldolase 
Protein accessionACX40878 
Protein GI260450456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGTA AAAAACTTTA TATCTCGGAC GTCACATTGC GTGACGGTAT GCACGCCATT 
CGTCATCAGT ATTCGCTGGA AAACGTTCGC CAGATTGCCA AAGCACTGGA CGATGCCCGC
GTGGATTCGA TTGAAGTGGC CCACGGCGAC GGTTTGCAAG GTTCCAGCTT TAACTATGGT
TTCGGCGCAC ATAGCGACCT TGAATGGATT GAAGCGGCGG CGGATGTGGT GAAGCACGCC
AAAATCGCGA CGTTGTTGCT GCCAGGAATC GGCACTATTC ACGATCTGAA AAATGCCTGG
CAGGCTGGCG CGCGGGTGGT TCGTGTGGCA ACGCACTGTA CCGAAGCTGA TGTTTCCGCC
CAGCATATTC AGTATGCCCG CGAGCTCGGA ATGGACACCG TTGGTTTTCT GATGATGAGC
CATATGACCA CGCCGGAGAA TCTCGCCAAG CAGGCAAAGC TGATGGAAGG CTACGGTGCG
ACCTGTATTT ATGTGGTGGA TTCTGGCGGT GCGATGAACA TGAGCGATAT CCGTGACCGT
TTCCGCGCCC TGAAAGCAGA GCTGAAACCA GAAACGCAAA CTGGCATGCA CGCTCACCAT
AACCTGAGTC TTGGCGTGGC GAACTCTATC GCGGCGGTGG AAGAGGGCTG CGACCGAATC
GACGCCAGCC TCGCGGGAAT GGGCGCGGGC GCAGGTAACG CACCGCTGGA AGTGTTTATT
GCCGCCGCGG ATAAACTGGG CTGGCAGCAT GGGACCGATC TCTATGCGTT AATGGATGCC
GCCGACGACC TGGTGCGTCC GTTGCAGGAT CGACCGGTAC GAGTCGATCG CGAAACGCTG
GCGCTGGGAT ACGCTGGTGT TTACTCGAGC TTCCTGCGTC ACTGTGAAAC GGCGGCGGCG
CGTTATGGCT TAAGTGCGGT GGATATTCTC GTTGAGCTGG GCAAACGCCG GATGGTTGGC
GGCCAGGAGG ATATGATCGT TGACGTGGCG CTGGATCTGC GCAACAACAA ATAA
 
Protein sequence
MNGKKLYISD VTLRDGMHAI RHQYSLENVR QIAKALDDAR VDSIEVAHGD GLQGSSFNYG 
FGAHSDLEWI EAAADVVKHA KIATLLLPGI GTIHDLKNAW QAGARVVRVA THCTEADVSA
QHIQYARELG MDTVGFLMMS HMTTPENLAK QAKLMEGYGA TCIYVVDSGG AMNMSDIRDR
FRALKAELKP ETQTGMHAHH NLSLGVANSI AAVEEGCDRI DASLAGMGAG AGNAPLEVFI
AAADKLGWQH GTDLYALMDA ADDLVRPLQD RPVRVDRETL ALGYAGVYSS FLRHCETAAA
RYGLSAVDIL VELGKRRMVG GQEDMIVDVA LDLRNNK