| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3253 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3494285 |
|---|
| End bp | 3495496 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | benzoate transport |
|---|
| Protein accession | ACX40877 |
|---|
| Protein GI | 260450455 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACTC GTACCCCTTC ATCATCTTCA TCCCGCCTGA TGCTGACCAT CGGGCTTTGT
TTTTTGGTCG CTCTGATGGA AGGGCTGGAT CTTCAGGCGG CTGGCATTGC GGCGGGTGGC
ATCGCCCAGG CTTTCGCACT CGATAAAATG CAAATGGGCT GGATATTTAG CGCCGGAATA
CTCGGTTTGC TACCCGGCGC GTTGGTTGGC GGAATGCTGG CGGACCGTTA TGGTCGCAAG
CGCATTTTGA TTGGCTCAGT TGCGCTGTTT GGTTTGTTCT CACTGGCAAC GGCGATTGCC
TGGGATTTCC CCTCACTGGT CTTTGCGCGG CTGATGACCG GTGTCGGGCT GGGGGCGGCG
TTGCCGAATC TTATCGCCCT GACGTCTGAA GCCGCGGGTC CACGTTTTCG TGGGACGGCA
GTGAGCCTGA TGTATTGCGG TGTTCCCATT GGCGCGGCGC TGGCGGCGAC ACTGGGTTTC
GCGGGGGCAA ACTTAGCATG GCAAACGGTG TTTTGGGTAG GTGGTGTGGT GCCGTTGATT
CTGGTGCCGC TATTAATGCG CTGGCTGCCG GAGTCGGCGG TTTTCGCTGG CGAAAAACAG
TCTGCGCCAC CACTGCGTGC CTTATTTGCG CCAGAAACGG CAACCGCGAC GCTGCTGCTG
TGGTTGTGTT ATTTCTTCAC TCTGCTGGTG GTCTACATGT TGATCAACTG GCTACCGCTA
CTTTTGGTGG AGCAAGGATT CCAGCCATCG CAGGCGGCAG GGGTGATGTT TGCCCTGCAA
ATGGGGGCGG CAAGCGGGAC GTTAATGTTG GGCGCATTGA TGGATAAGCT GCGTCCAGTA
ACCATGTCGC TACTGATTTA TAGCGGCATG TTAGCTTCGC TGCTGGCGCT TGGAACGGTG
TCGTCATTTA ACGGTATGTT GCTGGCGGGA TTTGTCGCGG GGTTGTTTGC GACAGGTGGG
CAAAGCGTTT TGTATGCCCT GGCACCGTTG TTTTACAGTT CGCAGATCCG CGCAACAGGT
GTGGGAACAG CCGTGGCGGT AGGGCGTCTG GGGGCTATGA GCGGTCCGTT ACTGGCCGGG
AAAATGCTGG CATTAGGCAC TGGCACGGTC GGCGTAATGG CCGCTTCTGC ACCGGGTATT
CTTGTTGCTG GGTTGGCGGT GTTTATTTTG ATGAGCCGGA GATCACGAAT ACAGCCGTGC
GCCGATGCCT GA
|
|---|
| Protein sequence | MSTRTPSSSS SRLMLTIGLC FLVALMEGLD LQAAGIAAGG IAQAFALDKM QMGWIFSAGI
LGLLPGALVG GMLADRYGRK RILIGSVALF GLFSLATAIA WDFPSLVFAR LMTGVGLGAA
LPNLIALTSE AAGPRFRGTA VSLMYCGVPI GAALAATLGF AGANLAWQTV FWVGGVVPLI
LVPLLMRWLP ESAVFAGEKQ SAPPLRALFA PETATATLLL WLCYFFTLLV VYMLINWLPL
LLVEQGFQPS QAAGVMFALQ MGAASGTLML GALMDKLRPV TMSLLIYSGM LASLLALGTV
SSFNGMLLAG FVAGLFATGG QSVLYALAPL FYSSQIRATG VGTAVAVGRL GAMSGPLLAG
KMLALGTGTV GVMAASAPGI LVAGLAVFIL MSRRSRIQPC ADA
|
|---|
| |