| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3233 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3474668 |
|---|
| End bp | 3475825 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | ACX40859 |
|---|
| Protein GI | 260450437 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAACGTA GTCTGCTTTT TTCTGCCGTG CTGTGTGCGG CGTCATTGAC CTCCGTCCAT
GCGGCGCAGC CGATCACTGA ACCGGAGTTT GCCTCTGATA TTGTCGATCG TTATGCCGAT
CATATTTTTT ACGGCAGCGG TGCCACGGGG ATGGCTCTGG TTGTTATCGA CGGTAACCAG
CGCGTCTTTC GCAGTTATGG CGAAACGCGA CCTGGTAATA ACGTTCGCCC GCAGCTGGAT
TCGGTCGTGC GTATTGCTTC CCTCACCAAG CTAATGACCA GTGAGATGCT GGTGAAATTG
CTCGACCAGG GGACCGTGAA GTTAAACGAT CCGCTAAGTA AATATGCTCC GCCAGGCGCA
CGCGTGCCAA CCTACAATGG GACGCCCATT ACGCTGGTCA ATCTGGCAAC CCATACCAGC
GCCCTGCCCC GTGAACAGCC CGGTGGCGCG GCACATCGTC CGGTGTTTGT CTGGCCAACG
CGCGAGCAAC GCTGGAAATA CCTTTCTACG GCGAAGCTGA AAGCCGCGCC AGGCAGTCAG
GCGGCGTACT CTAACCTTGC GTTCGACCTG CTGGCAGATG CACTGGCGAA TGCGTCCGGC
AAGCCTTATA CCCAGTTGTT TGAAGAGCAG ATTACCCGTC CATTGGGGAT GAAAGACACC
ACCTACACCC CCTCACCGGA TCAGTGCCGC CGTTTAATGG TTGCTGAGCG CGGTGCCAGT
CCGTGCAATA ACACGCTGGC GGCAATTGGC AGCGGCGGCG TCTATTCCAC GCCTGGCGAT
ATGATGCGCT GGATGCAGCA GTATTTGTCA TCTGATTTTT ATCAGCGCAG TAACCAGGCA
GATCGCATGC AGACGTTGAT TTATCAGCGC GCGCAGTTTA CGAAAGTGAT TGGCATGGAT
GTCCCCGGCA AAGCGGATGC GCTTGGTTTA GGTTGGGTAT ATATGGCCCC GAAAGAGGGT
CGTCCGGGGA TTATTCAGAA GACAGGCGGT GGTGGCGGTT TCATTACCTA TATGGCGATG
ATCCCGCAGA AGAATATTGG CGCGTTTGTG GTGGTCACTC GTTCGCCGTT GACGCGCTTT
AAAAATATGA GCGATGGCAT CAATGACCTG GTGACCGAGC TAAGCGGGAA TAAACCGTTG
GTTATCCCCG CGTCCTGA
|
|---|
| Protein sequence | MKRSLLFSAV LCAASLTSVH AAQPITEPEF ASDIVDRYAD HIFYGSGATG MALVVIDGNQ
RVFRSYGETR PGNNVRPQLD SVVRIASLTK LMTSEMLVKL LDQGTVKLND PLSKYAPPGA
RVPTYNGTPI TLVNLATHTS ALPREQPGGA AHRPVFVWPT REQRWKYLST AKLKAAPGSQ
AAYSNLAFDL LADALANASG KPYTQLFEEQ ITRPLGMKDT TYTPSPDQCR RLMVAERGAS
PCNNTLAAIG SGGVYSTPGD MMRWMQQYLS SDFYQRSNQA DRMQTLIYQR AQFTKVIGMD
VPGKADALGL GWVYMAPKEG RPGIIQKTGG GGGFITYMAM IPQKNIGAFV VVTRSPLTRF
KNMSDGINDL VTELSGNKPL VIPAS
|
|---|
| |