Gene EcDH1_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3230 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3471989 
End bp3473083 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function DUF1615 
Protein accessionACX40856 
Protein GI260450434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGCG TCAATCCTCT ATCTTCGCTG TCATTGTTGG CGGTTCTGGT TTTAGCGGGG 
TGTAGTAGTC AGGCTCCGCA ACCGTTGAAA AAGGGCGAAA AAGCGATAGA TGTAGCGAGC
GTCGTGCGGC AGAAGATGCC TGCGAGCGTG AAAGACCGCG ATGCCTGGGC GAAAGATCTC
GCCACCACCT TTGAAAGTCA GGGGCTGGCA CCGACGCTGG AAAACGTCTG CTCGGTGCTG
GCGGTGGCGC AGCAGGAGTC AAATTATCAG GCAGATCCGG CCGTTCCGGG CTTAAGCAAG
ATCGCCTGGC AAGAGATTGA CCGTCGTGCT GAACGGATGC ACATTCCTGC TTTTCTGGTT
CATACCGCGC TAAAAATCAA ATCGCCAAAC GGCAAAAGTT ATAGCGAACG GTTAGATTCG
GTGCGTACAG AAAAGCAATT GAGCGCGATT TTTGACGATC TGATCAACAT GGTGCCAATG
GGGCAGACGC TGTTTGGTTC GCTCAATCCG GTGCGCACCG GTGGGCCGAT GCAGGTCAGC
ATTGCTTTTG CCGAACAGCA TACCAAAGGG TATCCGTGGA AAATGGACGG TACAGTCCGT
CAGGAAGTCT TCAGTCGCCG CGGCGGGTTG TGGTTTGGTA CTTACCATTT ACTGAATTAT
CCCGCCAGTT ATAGCGCACC GATATACCGT TTTGCTGATT TTAACGCTGG CTGGTACGCC
AGCCGTAATG CCGCGTTTCA GAACGCGGTC AGTAAGGCCA GCGGCGTGAA GCTGGCACTG
GACGGTGATT TAATTCGTTA CGACAGTAAA GAACCCGGGA AAACCGAACT GGCAACGCGC
AAACTGGCTG CAAAACTGGG GATGAGCGAC AGCGAAATTC GCCGTCAGTT AGAGAAAGGT
GACAGCTTCT CTTTTGAGGA GACGGCGCTG TACAAGAAAG TTTATCAACT TGCCGAAACG
AAAACGGGTA AATCACTCCC CCGCGAAATG TTGCCTGGCA TTCAACTGGA AAGCCCGAAA
ATCACCCGCA ACCTGACTAC GGCCTGGTTT GCGAAGCGCG TAGACGAACG GCGGGCGCGT
TGTATGAAAC AGTGA
 
Protein sequence
MSRVNPLSSL SLLAVLVLAG CSSQAPQPLK KGEKAIDVAS VVRQKMPASV KDRDAWAKDL 
ATTFESQGLA PTLENVCSVL AVAQQESNYQ ADPAVPGLSK IAWQEIDRRA ERMHIPAFLV
HTALKIKSPN GKSYSERLDS VRTEKQLSAI FDDLINMVPM GQTLFGSLNP VRTGGPMQVS
IAFAEQHTKG YPWKMDGTVR QEVFSRRGGL WFGTYHLLNY PASYSAPIYR FADFNAGWYA
SRNAAFQNAV SKASGVKLAL DGDLIRYDSK EPGKTELATR KLAAKLGMSD SEIRRQLEKG
DSFSFEETAL YKKVYQLAET KTGKSLPREM LPGIQLESPK ITRNLTTAWF AKRVDERRAR
CMKQ