Gene EcDH1_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3201 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3441461 
End bp3443275 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein-export membrane protein SecD 
Protein accessionACX40827 
Protein GI260450405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.167397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCG TGGTGATTGT CATCGGTCTG CTGTATGCGC TTCCCAACCT GTTTGGTGAG 
GATCCGGCTG TTCAGATCAC TGGTGCGCGC GGAGTCGCCG CCAGTGAGCA AACGCTGATC
CAGGTCCAGA AAACGTTACA AGAAGAAAAA ATAACTGCTA AGTCTGTGGC ACTGGAAGAG
GGCGCTATTC TTGCGCGCTT CGACTCCACT GACACCCAGT TGCGCGCTCG TGAAGCATTA
ATGGGCGTTA TGGGTGACAA ATACGTCGTG GCGCTTAACC TTGCCCCGGC AACGCCGCGC
TGGCTGGCAG CTATTCACGC TGAGCCGATG AAGCTCGGCC TTGACCTGCG TGGCGGCGTT
CACTTCCTGA TGGAAGTGGA TATGGACACC GCGCTTGGCA AACTCCAGGA ACAAAATATC
GATAGCCTAC GCAGTGACCT GCGCGAAAAG GGCATCCCGT ATACCACTGT TCGTAAAGAA
AACAACTACG GCCTGAGCAT CACTTTCCGC GATGCTAAAG CTCGTGATGA AGCCATTGCG
TATCTGAGCA AGCGCCATCC GGACCTGGTG ATTAGCAGCC AGGGCAGCAA CCAGCTGCGT
GCGGTAATGA GCGATGCTCG TCTGAGTGAA GCGCGTGAAT ATGCGGTGCA GCAGAACATT
AATATCCTGC GTAACCGTGT AAACCAACTT GGCGTGGCGG AGCCGGTGGT TCAGCGTCAG
GGTGCTGACC GTATCGTTGT TGAACTGCCA GGTATTCAGG ACACTGCGCG TGCGAAAGAG
ATTCTGGGTG CGACGGCAAC GCTGGAATTC CGTCTGGTAA ACACCAACGT TGACCAGGCC
GCTGCGGCAT CCGGTCGCGT ACCGGGCGAC TCTGAAGTGA AACAGACCCG CGAAGGTCAG
CCAGTTGTGC TGTACAAACG CGTAATTCTG ACCGGTGACC ATATCACCGA CTCCACTTCC
AGCCAGGACG AATACAACCA ACCGCAGGTT AACATCTCGC TCGATAGCGC TGGTGGTAAC
ATCATGTCTA ACTTCACTAA GGACAACATC GGCAAACCGA TGGCAACCCT GTTTGTGGAG
TACAAAGACA GCGGTAAGAA AGATGCAAAT GGTCGTGCGG TTCTGGTGAA ACAGGAAGAG
GTGATTAACA TCGCCAACAT CCAGTCTCGT CTGGGTAACA GCTTCCGTAT CACCGGCATC
AACAACCCGA ACGAAGCCCG TCAGCTGTCA CTGCTGCTGC GTGCCGGTGC GTTGATCGCG
CCGATTCAGA TTGTTGAAGA ACGTACCATT GGCCCAACCC TGGGTATGCA GAACATTGAA
CAGGGGCTGG AGGCTTGCCT TGCCGGTCTG CTGGTTTCTA TTCTGTTCAT GATCATCTTC
TATAAGAAGT TTGGTCTGAT TGCGACCAGT GCTCTGATTG CCAACTTGAT CTTAATCGTC
GGCATTATGT CGCTGTTGCC AGGCGCAACG CTGAGTATGC CAGGTATCGC GGGTATCGTC
TTAACCCTTG CGGTGGCGGT CGATGCGAAC GTACTGATCA ACGAACGTAT TAAAGAAGAG
TTGAGCAACG GACGTACTGT TCAACAGGCA ATTGATGAAG GTTATCGTGG CGCATTCAGT
TCTATCTTCG ATGCGAACAT CACCACGCTG ATTAAAGTCA TCATCCTGTA CGCAGTGGGT
ACCGGGGCAA TTAAAGGGTT CGCGATTACT ACCGGTATCG GTGTGGCGAC GTCGATGTTT
ACCGCGATTG TCGGTACGCG TGCCATCGTA AACCTGCTAT ATGGCGGCAA GCGCGTCAAG
AAGCTGTCAA TCTGA
 
Protein sequence
MLIVVIVIGL LYALPNLFGE DPAVQITGAR GVAASEQTLI QVQKTLQEEK ITAKSVALEE 
GAILARFDST DTQLRAREAL MGVMGDKYVV ALNLAPATPR WLAAIHAEPM KLGLDLRGGV
HFLMEVDMDT ALGKLQEQNI DSLRSDLREK GIPYTTVRKE NNYGLSITFR DAKARDEAIA
YLSKRHPDLV ISSQGSNQLR AVMSDARLSE AREYAVQQNI NILRNRVNQL GVAEPVVQRQ
GADRIVVELP GIQDTARAKE ILGATATLEF RLVNTNVDQA AAASGRVPGD SEVKQTREGQ
PVVLYKRVIL TGDHITDSTS SQDEYNQPQV NISLDSAGGN IMSNFTKDNI GKPMATLFVE
YKDSGKKDAN GRAVLVKQEE VINIANIQSR LGNSFRITGI NNPNEARQLS LLLRAGALIA
PIQIVEERTI GPTLGMQNIE QGLEACLAGL LVSILFMIIF YKKFGLIATS ALIANLILIV
GIMSLLPGAT LSMPGIAGIV LTLAVAVDAN VLINERIKEE LSNGRTVQQA IDEGYRGAFS
SIFDANITTL IKVIILYAVG TGAIKGFAIT TGIGVATSMF TAIVGTRAIV NLLYGGKRVK
KLSI