Gene EcDH1_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3199 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3440003 
End bp3440350 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content47% 
IMG OID 
ProductHNH endonuclease 
Protein accessionACX40825 
Protein GI260450403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00688209 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCA TCCCAAAAAA CTATGCGCGG TTAGAAAGCG GCTATCGCGA AAAAGCATTA 
AAAATCTATC CGTGGGTCTG CGGTCGCTGT TCCCGCGAGT TTGTTTATTC CAACCTGCGT
GAACTTACCG TTCACCACAT TGATCACGAC CATACCAATA ACCCGGAAGA TGGCAGTAAC
TGGGAATTGT TGTGTCTCTA TTGCCACGAT CATGAGCATT CGAAATATAC CGAAGCGGAT
CAGTATGGTA CGACCGTTAT CGCAGGGGAA GATGCGCAGA AAGATGTCGG TGAAGCGAAG
TACAACCCAT TCGCTGACCT GAAAGCGATG ATGAACAAGA AGAAGTGA
 
Protein sequence
MAIIPKNYAR LESGYREKAL KIYPWVCGRC SREFVYSNLR ELTVHHIDHD HTNNPEDGSN 
WELLCLYCHD HEHSKYTEAD QYGTTVIAGE DAQKDVGEAK YNPFADLKAM MNKKK