Gene EcDH1_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3175 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3416788 
End bp3417366 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content51% 
IMG OID 
ProductUncharacterized lipoprotein 
Protein accessionACX40801 
Protein GI260450379 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000125975 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAAA AAATCCTCTT CCCGTTAGTT GCTCTGTTTA TGCTTGCAGG ATGCGCAAAA 
CCGCCAACAA CTATTGAAGT TTCCCCGACG ATTACACTGC CACAGCAGGA TCCAAGCCTG
ATGGGCGTCA CCGTAAGCAT TAATGGTGCC GATCAGCGTA CCGATCAGGC GCTGGCAAAA
GTCACCCGCG ATAATCAAAT CGTTACCCTG ACCGCCTCCC GCGATCTGCG TTTCCTGCTG
CAAGAAGTGC TGGAAAAACA GATGACCGCG CGTGGTTACA TGGTTGGTCC GAATGGCCCG
GTTAATCTGC AAATCATCGT TAGCCAACTG TATGCTGACG TGTCCCAGGG CAACGTGCGC
TACAACATCG CGACCAAAGC GGATATCGCC ATCATCGCTA CCGCGCAGAA TGGCAACAAA
ATGACCAAAA ACTATCGTGC CAGCTACAAC GTTGAAGGTG CGTTCCAGGC CTCCAACAAA
AATATCGCCG ATGCGGTTAA CAGTGTGCTG ACCGATACCA TCGCTGATAT GTCTCAGGAC
ACCAGCATCC ACGAATTCAT CAAGCAGAAC GCGCGTTAA
 
Protein sequence
MFKKILFPLV ALFMLAGCAK PPTTIEVSPT ITLPQQDPSL MGVTVSINGA DQRTDQALAK 
VTRDNQIVTL TASRDLRFLL QEVLEKQMTA RGYMVGPNGP VNLQIIVSQL YADVSQGNVR
YNIATKADIA IIATAQNGNK MTKNYRASYN VEGAFQASNK NIADAVNSVL TDTIADMSQD
TSIHEFIKQN AR