Gene EcDH1_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3163 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3402725 
End bp3403543 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content51% 
IMG OID 
ProductCof-like hydrolase 
Protein accessionACX40789 
Protein GI260450367 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTC TGGCAGCATT TGATATGGAT GGCACTTTAT TGATGCCCGA CCATCATTTA 
GGTGAGAAAA CCCTCTCTAC TTTGGCGCGA CTGCGTGAAC GCGACATTAC CCTCACTTTT
GCCACGGGGC GTCATGCGCT GGAGATGCAG CATATTCTCG GGGCGCTATC GCTGGATGCG
TATTTGATTA CCGGCAACGG AACGCGCGTG CATTCTCTGG AAGGTGAACT TTTACATCGT
GATGATTTAC CTGCGGATGT CGCGGAGCTG GTGCTGTATC AGCAATGGGA TACCCGAGCC
AGCATGCATA TCTTCAATGA CGACGGTTGG TTTACCGGGA AAGAGATCCC TGCGTTGTTG
CAGGCATTTG TCTATAGCGG TTTTCGTTAT CAGATAATCG ATGTCAAAAA AATGCCACTC
GGCAGCGTCA CCAAGATCTG CTTCTGTGGC GATCACGACG ATCTTACACG CTTGCAGATC
CAGCTATACG AAGCATTAGG CGAGCGTGCA CATTTGTGTT TTTCCGCCAC GGATTGCCTC
GAAGTGCTGC CGGTGGGCTG CAATAAAGGC GCTGCATTGA CGGTGCTGAC CCAACATTTA
GGTTTATCGT TGCGCGATTG CATGGCCTTT GGTGATGCGA TGAACGATCG CGAAATGTTA
GTCAGCGTCG GTAGCGGATT TATTATGGGC AATGCGATGC CGCAACTGCG CGCGGAGCTC
CCGCATTTAC CGGTGATTGG ACATTGCCGA AATCAGGCTG TCTCTCACTA TTTGACGCAC
TGGCTGGACT ATCCACATCT ACCTTATTCC CCCGAATAA
 
Protein sequence
MARLAAFDMD GTLLMPDHHL GEKTLSTLAR LRERDITLTF ATGRHALEMQ HILGALSLDA 
YLITGNGTRV HSLEGELLHR DDLPADVAEL VLYQQWDTRA SMHIFNDDGW FTGKEIPALL
QAFVYSGFRY QIIDVKKMPL GSVTKICFCG DHDDLTRLQI QLYEALGERA HLCFSATDCL
EVLPVGCNKG AALTVLTQHL GLSLRDCMAF GDAMNDREML VSVGSGFIMG NAMPQLRAEL
PHLPVIGHCR NQAVSHYLTH WLDYPHLPYS PE