| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3161 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3400312 |
|---|
| End bp | 3402084 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | ACX40787 |
|---|
| Protein GI | 260450365 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGATTAT TTGCTCAATT AAGCTGGTAT TTCCGTCGGG AATGGCGTCG CTATCTCGGG
GCTGTCGCCT TGCTTGTCAT TATCGCGATG CTGCAACTGG TTCCGCCAAA AGTGGTTGGT
ATTGTTGTCG ATGGCGTGAC AGAACAACAC TTTACTACCG GGCAGATCCT GATGTGGATC
GCCACCATGG TGCTGATTGC CGTTGTGGTT TATCTCCTGC GTTACGTCTG GCGGGTATTG
CTGTTTGGTG CGTCTTATCA ACTGGCTGTT GAACTGCGTG AAGATTATTA CCGTCAGCTA
AGCCGGCAGC ATCCTGAGTT TTACCTGCGT CATCGCACCG GTGACCTCAT GGCTCGTGCG
ACCAATGACG TCGATCGCGT CGTGTTTGCC GCCGGAGAAG AGGTGCTGAC GCTGGTGGAT
TCACTGGTGA TGGGCTGCGC TGTGTTGATT ATGATGTCTA CGCAAATTAG CTGGCAGTTG
ACCTTATTTT CCCTGTTGCC GATGCCAGTG ATGGCGATCA TGATTAAGCG CAACGGCGAT
GCTTTGCATG AACGCTTTAA GCTGGCACAG GCGGCGTTTT CCAGTCTTAA TGACCGCACC
CAGGAAAGCC TCACCAGTAT CCGCATGATC AAAGCCTTTG GTCTGGAAGA TCGCCAGTCG
GCGTTATTTG CCGCGGATGC CGAAGATACC GGCAAAAAAA ACATGCGGGT GGCGCGTATT
GATGCTCGTT TCGACCCGAC CATCTATATC GCGATTGGTA TGGCGAACTT GCTGGCGATT
GGCGGCGGTA GTTGGATGGT GGTGCAGGGC AGTTTAACGC TGGGCCAGCT CACCAGTTTT
ATGATGTATT TAGGTCTGAT GATTTGGCCA ATGCTGGCGC TGGCATGGAT GTTTAACATT
GTGGAACGTG GTAGTGCTGC GTACAGCCGT ATTCGCGCGA TGCTGGCGGA AGCGCCGGTG
GTGAACGATG GTAGCGAACC CGTGCCGGAA GGGCGTGGCG AACTGGATGT AAATATTCAC
CAGTTCACGT ATCCGCAGAC TGACCATCCT GCGCTGGAAA ACGTCAATTT CGCCCTGAAA
CCCGGTCAGA TGCTGGGTAT CTGCGGGCCG ACTGGTTCCG GCAAAAGTAC CCTGTTGTCG
CTCATTCAGC GTCATTTCGA CGTCAGCGAG GGGGATATTC GCTTTCATGA TATTCCTCTG
ACGAAGTTAC AACTCGATAG CTGGCGTAGC CGCCTGGCGG TAGTTAGCCA GACGCCATTC
CTTTTTTCTG ACACTGTGGC GAATAACATC GCGCTGGGTT GCCCGAATGC CACCCAGCAA
GAGATTGAGC ATGTCGCGCG GTTAGCCAGC GTACATGACG ATATTTTGCG TCTACCGCAA
GGTTACGATA CAGAGGTGGG CGAGCGCGGT GTGATGCTTT CCGGCGGGCA AAAACAGCGT
ATCTCCATTG CTCGTGCGTT ATTAGTCAAC GCGGAAATCC TCATCCTTGA TGATGCGCTT
TCGGCGGTGG ACGGACGCAC TGAGCACCAG ATCCTGCATA ACCTGCGTCA GTGGGGGCAG
GGAAGAACGG TAATCATCAG TGCCCATCGC CTTTCTGCAC TGACGGAAGC CAGTGAAATT
ATTGTGATGC AGCACGGACA TATCGCCCAG CGTGGCAATC ATGATGTGCT GGCACAACAA
AGCGGCTGGT ATCGCGATAT GTATCGCTAT CAACAACTGG AGGCGGCGCT CGACGACGCT
CCGGAAAATC GCGAGGAGGC CGTCGATGCG TAG
|
|---|
| Protein sequence | MRLFAQLSWY FRREWRRYLG AVALLVIIAM LQLVPPKVVG IVVDGVTEQH FTTGQILMWI
ATMVLIAVVV YLLRYVWRVL LFGASYQLAV ELREDYYRQL SRQHPEFYLR HRTGDLMARA
TNDVDRVVFA AGEEVLTLVD SLVMGCAVLI MMSTQISWQL TLFSLLPMPV MAIMIKRNGD
ALHERFKLAQ AAFSSLNDRT QESLTSIRMI KAFGLEDRQS ALFAADAEDT GKKNMRVARI
DARFDPTIYI AIGMANLLAI GGGSWMVVQG SLTLGQLTSF MMYLGLMIWP MLALAWMFNI
VERGSAAYSR IRAMLAEAPV VNDGSEPVPE GRGELDVNIH QFTYPQTDHP ALENVNFALK
PGQMLGICGP TGSGKSTLLS LIQRHFDVSE GDIRFHDIPL TKLQLDSWRS RLAVVSQTPF
LFSDTVANNI ALGCPNATQQ EIEHVARLAS VHDDILRLPQ GYDTEVGERG VMLSGGQKQR
ISIARALLVN AEILILDDAL SAVDGRTEHQ ILHNLRQWGQ GRTVIISAHR LSALTEASEI
IVMQHGHIAQ RGNHDVLAQQ SGWYRDMYRY QQLEAALDDA PENREEAVDA
|
|---|
| |