Gene EcDH1_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3150 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3390647 
End bp3390865 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content40% 
IMG OID 
Producthemolysin expression modulating family protein 
Protein accessionACX40776 
Protein GI260450354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.483952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAA AATTTTTAAC GAAAACCGAT TATTTAATGC GTTTACGTCG TTGCCAGACA 
ATTGACACGC TGGAGCGTGT TATCGAGAAA AATAAATACG AATTATCAGA TAATGAACTG
GCGGTATTTT ACTCAGCCGC AGATCACCGC CTCGCCGAAT TGACCATGAA TAAACTGTAC
GACAAGATCC CTTCCTCAGT ATGGAAATTT ATTCGCTAA
 
Protein sequence
MSEKFLTKTD YLMRLRRCQT IDTLERVIEK NKYELSDNEL AVFYSAADHR LAELTMNKLY 
DKIPSSVWKF IR