| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3142 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3379696 |
|---|
| End bp | 3380073 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF454 |
|---|
| Protein accession | ACX40768 |
|---|
| Protein GI | 260450346 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0034209 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGAA TCATTTTAAT CATCATTGGC TGGCTGGCGG TAGTGCTGGG TACGCTGGGC
GTGGTATTAC CGGTATTACC GACGACGCCG TTTATCCTGC TGGCGGCCTG GTGCTTTGCC
CGTTCTTCCC CGCGCTTTCA CGCCTGGTTG CTGTACCGCT CATGGTTTGG CAGCTATCTA
CGTTTCTGGC AGAAACATCA TGCGATGCCG CGCGGCGTCA AACCGCGGGC GATTTTGCTT
ATTTTGCTCA CGTTTGCCAT TTCTCTGTGG TTCGTCCAGA TGCCATGGGT GCGCATCATG
TTGCTGGTAA TTCTCGCCTG TTTGCTTTTC TATATGTGGC GAATTCCGGT GATTGATGAA
AAGCAAGAAA AGCACTGA
|
|---|
| Protein sequence | MQRIILIIIG WLAVVLGTLG VVLPVLPTTP FILLAAWCFA RSSPRFHAWL LYRSWFGSYL
RFWQKHHAMP RGVKPRAILL ILLTFAISLW FVQMPWVRIM LLVILACLLF YMWRIPVIDE
KQEKH
|
|---|
| |