Gene EcDH1_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3141 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3378992 
End bp3379543 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content54% 
IMG OID 
Productadenine phosphoribosyltransferase 
Protein accessionACX40767 
Protein GI260450345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000274738 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCGA CTGCACAGCA GCTTGAGTAT CTCAAAAATA GCATCAAAAG CATTCAGGAC 
TACCCAAAAC CCGGCATTCT TTTCCGCGAT GTCACCAGCT TACTGGAAGA CCCGAAAGCT
TACGCTCTCA GCATCGACTT GCTGGTTGAG CGTTACAAAA ATGCGGGCAT TACCAAAGTT
GTCGGCACCG AAGCGCGTGG CTTCTTGTTT GGCGCTCCGG TAGCTCTGGG TCTGGGCGTT
GGCTTTGTAC CGGTCCGTAA ACCGGGCAAA CTGCCGCGTG AAACCATCAG TGAAACTTAC
GACCTGGAAT ACGGCACCGA TCAGCTGGAG ATCCACGTTG ATGCCATCAA ACCGGGCGAC
AAAGTTCTGG TGGTGGACGA CCTGCTGGCA ACCGGCGGCA CTATCGAAGC GACCGTTAAA
CTGATCCGTC GTCTGGGTGG TGAAGTGGCT GACGCTGCGT TCATTATCAA CCTGTTCGAT
CTCGGCGGCG AACAGCGTCT CGAAAAACAG GGCATTACCA GCTACAGCCT TGTCCCGTTC
CCGGGCCATT AA
 
Protein sequence
MTATAQQLEY LKNSIKSIQD YPKPGILFRD VTSLLEDPKA YALSIDLLVE RYKNAGITKV 
VGTEARGFLF GAPVALGLGV GFVPVRKPGK LPRETISETY DLEYGTDQLE IHVDAIKPGD
KVLVVDDLLA TGGTIEATVK LIRRLGGEVA DAAFIINLFD LGGEQRLEKQ GITSYSLVPF
PGH