Gene EcDH1_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3109 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3339729 
End bp3340823 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content56% 
IMG OID 
ProducttRNA 2-selenouridine synthase 
Protein accessionACX40735 
Protein GI260450313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAGA GACACACGGA ACAGGACTAT CGTGCCCTGC TGATTGCTGA TACGCCCATT 
ATTGATGTTC GCGCCCCTAT CGAGTTTGAG CACGGCGCAA TGCCCGCCGC TATCAATCTG
CCGTTAATGA ATAACGATGA ACGCGCCGCC GTTGGCACCT GCTATAAACA GCAAGGCTCA
GACGCAGCGC TGGCGCTGGG ACATAAACTG GTGGCGGGTG AAATTCGTCA GCAGCGCATG
GACGCCTGGC GGGCAGCGTG CCTGCAAAAT CCGCAAGGTA TTCTCTGCTG CGCCCGTGGC
GGTCAGCGCT CACATATTGT GCAAAGCTGG TTGCATGCAG CGGGGATTGA TTATCCGCTG
GTGGAAGGCG GTTATAAGGC ACTGCGCCAG ACCGCGATTC AGGCGACTAT TGAACTGGCA
CAAAAACCGA TAGTGCTGAT TGGCGGTTGT ACCGGCAGCG GTAAAACGCT GTTAGTGCAG
CAACAGCCGA ACGGTGTTGA TCTGGAAGGG TTGGCGCGTC ATCGCGGTTC GGCGTTTGGT
CGCACGTTAC AACCACAACT TAGCCAGGCG AGTTTTGAAA ACCTGCTGGC TGCCGAAATG
CTAAAAACCG ACGCCCGTCA GAATTTGCGC CTGTGGGTGC TGGAAGACGA AAGCCGGATG
ATCGGTTCGA ATCACCTGCC GGAATGCCTG CGCGAGCGAA TGACTCAGGC GGCGATTGCG
GTGGTAGAAG ATCCGTTTGA GATCCGTCTT GAGCGCCTGA ACGAAGAGTA TTTCTTGCGT
ATGCATCATG ATTTTACCCA CGCGTACGGC GACGAACAGG GCTGGCAGGA GTATTGCGAA
TACCTGCATC ACGGACTTTC GGCGATTAAG CGTCGGCTGG GGCTACAGCG CTATAACGAA
CTGGCTGCAA GGCTGGATGC AGCACTGACA ACGCAACTCA CCACCGGCAG CACCGACGGT
CATCTGGCCT GGCTGGTGCC GTTACTTGAA GAATATTACG ACCCGATGTA TCGCTATCAG
CTTGAGAAAA AAGCGGAAAA AGTTGTCTTT CGCGGTGAGT GGGCGGAAGT GGCGGAATGG
GTTAAGGCGC GGTAA
 
Protein sequence
MQERHTEQDY RALLIADTPI IDVRAPIEFE HGAMPAAINL PLMNNDERAA VGTCYKQQGS 
DAALALGHKL VAGEIRQQRM DAWRAACLQN PQGILCCARG GQRSHIVQSW LHAAGIDYPL
VEGGYKALRQ TAIQATIELA QKPIVLIGGC TGSGKTLLVQ QQPNGVDLEG LARHRGSAFG
RTLQPQLSQA SFENLLAAEM LKTDARQNLR LWVLEDESRM IGSNHLPECL RERMTQAAIA
VVEDPFEIRL ERLNEEYFLR MHHDFTHAYG DEQGWQEYCE YLHHGLSAIK RRLGLQRYNE
LAARLDAALT TQLTTGSTDG HLAWLVPLLE EYYDPMYRYQ LEKKAEKVVF RGEWAEVAEW
VKAR