Gene EcDH1_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3083 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3312201 
End bp3312743 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content45% 
IMG OID 
ProductFimbrial protein 
Protein accessionACX40709 
Protein GI260450287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0205144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA GATTTATTTC GTCTGCGCTG GCTGCCGCAC TATTCGCCGC TACGGGTAGT 
TATGCTGCCG TTGTAGATGG CGGTACAATT CACTTTGAAG GCGAACTGGT GAATGCTGCC
TGTTCAGTGA ATACTGACTC GGCAGACCAG GTTGTCACAC TCGGTCAATA TCGTACCGAT
ATTTTCAATG CTGTTGGTAA TACCTCTGCA TTAATTCCAT TCACCATTCA GTTGAACGAC
TGCGATCCTG TTGTTGCCGC TAATGCTGCC GTTGCATTTT CTGGTCAGGC TGATGCAATC
AATGATAATT TATTGGCCAT TGCATCCAGT ACCAATACAA CAACAGCAAC GGGTGTCGGT
ATTGAAATAC TTGATAATAC ATCCGCAATT CTCAAACCTG ATGGGAATAG CTTCTCAACC
AACCAGAACT TGATCCCCGG GACCAACGTT CTTCATTTTT CTGCACGTTA TAAAGGCACC
GGTACAAGTG CATCAGCAGG GCAAGCAAAT GCTGACGCGA CTTTTATTAT GAGATATGAA
TAA
 
Protein sequence
MKLRFISSAL AAALFAATGS YAAVVDGGTI HFEGELVNAA CSVNTDSADQ VVTLGQYRTD 
IFNAVGNTSA LIPFTIQLND CDPVVAANAA VAFSGQADAI NDNLLAIASS TNTTTATGVG
IEILDNTSAI LKPDGNSFST NQNLIPGTNV LHFSARYKGT GTSASAGQAN ADATFIMRYE