| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3065 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3296689 |
|---|
| End bp | 3297438 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | ACX40693 |
|---|
| Protein GI | 260450271 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0508802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTATG TTTGCTCCGT AGTTTTCATC TGTCAATCAT TTGATTTAAT TATAAACAGG
AGAGTTATCT CGTTCAAAAA AAATTCATTG TTTATTGTAA GCGACAAAAT TAGAAGGGAG
TTACCAGTAT GCCCCTCTAA ACTAAGAATT GTTGATATAG ATAAGAAAAC ATGTTTATCC
TTTTTTATCG ACGTGAATAA TGAGCTGCCT GGCAAATTTA CTCTTGATAA GAATGGCTAT
ATTGCTGAAG AGGAACCTCC ATTATCGCTT GTTTTTTCTC TGTTTGAAGG GATTAAAATA
GCAGACTCAC ACTCCCTTTG GTTAAAAGAA AGACTATGTA TATCCTTACT TGCCATGTTC
AAAAAACGCG AAAGTGTAAA TTCATTTATA CTAACAAATA TAAATACATT TACCTGTAAA
ATTACTGGAA TAATCAGTTT TAATATTGAG CGGCAATGGC ATTTAAAAGA TATTGCGGAA
TTGATTTATA CGAGTGAAAG TTTAATAAAA AAAAGATTAA GGGATGAAGG AACGTCATTT
ACTGAAATAT TGAGAGATAC TAGGATGAGG TATGCAAAAA AACTCATAAC TTCAAACTCT
TATTCTATCA ATGTCGTAGC CCAGAAATGT GGCTATAACA GTACTTCATA TTTCATATGT
GCATTTAAAG ATTATTATGG TGTCACGCCA TCTCATTATT TTGAGAAAAT AATCGGCGTC
ACAGATGGAA TAAACAAAAC AATTGACTGA
|
|---|
| Protein sequence | MDYVCSVVFI CQSFDLIINR RVISFKKNSL FIVSDKIRRE LPVCPSKLRI VDIDKKTCLS
FFIDVNNELP GKFTLDKNGY IAEEEPPLSL VFSLFEGIKI ADSHSLWLKE RLCISLLAMF
KKRESVNSFI LTNINTFTCK ITGIISFNIE RQWHLKDIAE LIYTSESLIK KRLRDEGTSF
TEILRDTRMR YAKKLITSNS YSINVVAQKC GYNSTSYFIC AFKDYYGVTP SHYFEKIIGV
TDGINKTID
|
|---|
| |