| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3037 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3259931 |
|---|
| End bp | 3260923 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | ACX40665 |
|---|
| Protein GI | 260450243 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTACG TCTCTCGCCG ATTACTCATC ACCTGTTTGC TGCTGGTTTC CGCCTGTGTG
GTTGCAGGTA TCTGGGGATT ACGCAGCGGT GCCGTCACGC TGGAAACCTC GCAGGTATTC
GCCGCGCTGA TGGGCGATGC GCCGCGCAGT ATGACGATGG TGGTCACCGA ATGGCGTTTA
CCACGCGTGC TGATGGCGCT GTTGATTGGC GCAGCACTGG GCGTCAGTGG CGCGATTTTT
CAGTCGCTGA TGCGTAACCC GCTCGGCAGC CCTGACGTAA TGGGCTTTAA CACCGGGGCG
TGGAGCGGCG TGCTGGTGGC GATGGTGCTG TTTGGTCAGG ACCTGACGGC TATCGCGCTG
TCAGCAATGG TGGGCGGCAT TGTCACTTCG CTGCTGGTCT GGCTGCTCGC CTGGCGCAAC
GGCATCGACA CCTTTCGGTT GATTATTATC GGTATCGGCG TTCGCGCCAT GCTGGTGGCC
TTTAATACCT GGCTGTTGCT GAAAGCGTCT TTAGAAACGG CGCTAACAGC AGGTTTGTGG
AATGCCGGAT CGCTCAACGG CCTGACGTGG GCAAAAACCT CGCCTTCCGC ACCCATCATT
ATATTGATGC TCATTGCCGC CGCCTTACTG GTACGCCGGA TGCGCTTGCT GGAAATGGGC
GATGATACCG CGTGTGCGCT GGGCGTCAGC GTCGAACGTT CGCGTCTGTT AATGATGCTG
GTTGCAGTGG TGCTTACCGC TGCGGCAACA GCGCTTGCCG GGCCGATTTC CTTTATTGCT
TTAGTCGCAC CGCACATTGC CCGACGCATT AGCGGCACCG CTCGCTGGGG GCTAACCCAG
GCGGCGCTAT GCGGGGCGCT GTTACTGCTG GCGGCCGATC TCTGCGCCCA ACAACTGTTT
ATGCCGTATC AACTTCCGGT TGGCGTCGTT ACCGTCAGCC TCGGCGGTAT TTACCTTATC
GTCTTGTTAA TTCAGGAGTC TCGCAAAAAA TGA
|
|---|
| Protein sequence | MIYVSRRLLI TCLLLVSACV VAGIWGLRSG AVTLETSQVF AALMGDAPRS MTMVVTEWRL
PRVLMALLIG AALGVSGAIF QSLMRNPLGS PDVMGFNTGA WSGVLVAMVL FGQDLTAIAL
SAMVGGIVTS LLVWLLAWRN GIDTFRLIII GIGVRAMLVA FNTWLLLKAS LETALTAGLW
NAGSLNGLTW AKTSPSAPII ILMLIAAALL VRRMRLLEMG DDTACALGVS VERSRLLMML
VAVVLTAAAT ALAGPISFIA LVAPHIARRI SGTARWGLTQ AALCGALLLL AADLCAQQLF
MPYQLPVGVV TVSLGGIYLI VLLIQESRKK
|
|---|
| |