Gene EcDH1_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3017 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3239252 
End bp3239680 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content50% 
IMG OID 
ProductUspA domain protein 
Protein accessionACX40645 
Protein GI260450223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.1115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAGA CAATCATTAT GCCAGTTGAT GTATTTGAAA TGGAATTGAG CGACAAAGCT 
GTTCGCCACG CTGAATTCCT CGCCCAGGAT GACGGAGTTA TTCATCTACT TCACGTACTA
CCCGGGTCAG CCAGCCTGAG CCTGCACCGT TTTGCCGCTG ATGTGCGTCG TTTTGAAGAG
CATCTGCAAC ATGAAGCACA AGAACGTCTG CAAACGATGG TCAGCCACTT CACCATCGAT
CCTTCCCGCA TTAAACAACA TGTCCGTTTT GGTAGCGTGC GGGATGAAGT CAATGAGTTG
GCAGAAGAAC TGGGGGCTGA TGTTGTAGTT ATTGGTTCTC GCAACCCATC GATTTCGACC
CATCTGTTAG GTTCTAACGC CTCGAGCGTG ATCCGCCACG CCAATCTGCC GGTGCTGGTT
GTGCGTTAA
 
Protein sequence
MYKTIIMPVD VFEMELSDKA VRHAEFLAQD DGVIHLLHVL PGSASLSLHR FAADVRRFEE 
HLQHEAQERL QTMVSHFTID PSRIKQHVRF GSVRDEVNEL AEELGADVVV IGSRNPSIST
HLLGSNASSV IRHANLPVLV VR