Gene EcDH1_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3009 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3230629 
End bp3231537 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content58% 
IMG OID 
Productcitrate lyase, beta subunit 
Protein accessionACX40637 
Protein GI260450215 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.473558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCCG CTTCGCTGCA ACAACGTAAA ACTCGCACCC GCCGCAGCAT GTTGTTTGTG 
CCTGGTGCCA ATGCCGCGAT GGTCAGCAAC TCCTTCATCT ACCCGGCTGA TGCCCTGATG
TTTGACCTCG AAGACTCCGT AGCATTGCGT GAAAAAGACA CCGCCCGCCG CATGGTTTAC
CACGCGCTGC AACATCCGCT GTATCGCGAT ATTGAAACCA TTGTGCGTGT CAACGCGCTG
GATTCCGAAT GGGGTGTTAA CGACCTGGAA GCCGTCGTTC GCGGTGGTGC GGACGTTGTG
CGTCTGCCGA AAACCGATAC CGCTCAGGAT GTTCTGGATA TTGAAAAAGA GATCCTGCGT
ATCGAAAAAG CCTGTGGTCG TGAACCCGGC AGCACCGGCC TGCTGGCGGC GATTGAATCT
CCGCTGGGGA TTACCCGCGC AGTGGAAATC GCTCACGCTT CCGAGCGTTT GATCGGTATC
GCCCTCGGTG CAGAAGACTA TGTGCGCAAC CTGCGTACAG AACGCTCCCC GGAAGGAACT
GAACTGCTGT TCGCACGCTG TTCCATTTTG CAGGCCGCGC GCTCTGCGGG TATTCAGGCG
TTCGATACCG TCTATTCCGA CGCTAACAAC GAAGCCGGAT TTCTGCAAGA AGCCGCCCAC
ATCAAACAGC TGGGCTTTGA CGGCAAATCG CTGATCAACC CGCGTCAGAT TGATCTGCTG
CACAACCTCT ACGCACCGAC CCAGAAAGAA GTGGATCACG CCCGCCGCGT CGTAGAAGCC
GCTGAAGCCG CCGCTCGCGA AGGCCTCGGC GTGGTTTCCC TGAACGGCAA GATGGTGGAC
GGTCCGGTTA TCGATCGCGC CCGTCTGGTG CTCTCCCGTG CAGAACTTTC CGGCATCCGC
GAAGAATAA
 
Protein sequence
MISASLQQRK TRTRRSMLFV PGANAAMVSN SFIYPADALM FDLEDSVALR EKDTARRMVY 
HALQHPLYRD IETIVRVNAL DSEWGVNDLE AVVRGGADVV RLPKTDTAQD VLDIEKEILR
IEKACGREPG STGLLAAIES PLGITRAVEI AHASERLIGI ALGAEDYVRN LRTERSPEGT
ELLFARCSIL QAARSAGIQA FDTVYSDANN EAGFLQEAAH IKQLGFDGKS LINPRQIDLL
HNLYAPTQKE VDHARRVVEA AEAAAREGLG VVSLNGKMVD GPVIDRARLV LSRAELSGIR
EE