| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3003 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3224002 |
|---|
| End bp | 3224562 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | Antimicrobial peptide resistance and lipid A acylation PagP |
|---|
| Protein accession | ACX40631 |
|---|
| Protein GI | 260450209 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.235931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGA GTAAATATGT CGCTATCTTT TCCTTTGTTT TTATTCAGTT AATCAGCGTT
GGTAAAGTTT TTGCTAACGC AGATGAGTGG ATGACAACGT TTAGAGAAAA TATTGCACAA
ACCTGGCAAC AGCCTGAACA TTATGATTTA TATATTCCTG CCATCACCTG GCATGCACGT
TTCGCTTACG ACAAAGAAAA AACCGATCGC TATAACGAGC GACCGTGGGG TGGCGGTTTT
GGCCTGTCGC GTTGGGATGA AAAAGGAAAC TGGCATGGCC TGTATGCCAT GGCATTTAAG
GACTCGTGGA ACAAATGGGA ACCGATTGCC GGATACGGAT GGGAAAGTAC CTGGCGACCG
CTGGCGGATG AAAATTTTCA TTTAGGTCTG GGATTCACCG CTGGCGTAAC GGCACGCGAT
AACTGGAATT ACATCCCTCT CCCGGTTCTA CTGCCATTGG CCTCCGTGGG TTATGGCCCA
GTGACTTTTC AGATGACCTA CATTCCGGGT ACCTACAACA ATGGCAATGT GTACTTTGCC
TGGATGCGCT TTCAGTTTTG A
|
|---|
| Protein sequence | MNVSKYVAIF SFVFIQLISV GKVFANADEW MTTFRENIAQ TWQQPEHYDL YIPAITWHAR
FAYDKEKTDR YNERPWGGGF GLSRWDEKGN WHGLYAMAFK DSWNKWEPIA GYGWESTWRP
LADENFHLGL GFTAGVTARD NWNYIPLPVL LPLASVGYGP VTFQMTYIPG TYNNGNVYFA
WMRFQF
|
|---|
| |