Gene EcDH1_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2968 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3189335 
End bp3190213 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content52% 
IMG OID 
Producttransporter-associated region 
Protein accessionACX40597 
Protein GI260450175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.386789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG ACAATTCACA CAGTAGTGAC ACGATAAGCA ACAAGAAGGG ATTTTTCTCC 
CTGTTACTCA GCCAACTTTT CCACGGTGAA CCGAAAAACC GTGACGAACT GCTGGCGCTG
ATCCGTGATT CCGGGCAGAA CGACCTTATC GACGAAGATA CGCGCGATAT GCTCGAAGGG
GTGATGGACA TCGCAGACCA ACGCGTTCGC GACATCATGA TCCCCCGCTC CCAGATGATT
ACCCTGAAAC GCAACCAGAC GCTGGACGAA TGTCTTGATG TCATCATCGA GTCCGCCCAC
TCACGTTTCC CGGTGATTAG CGAAGACAAA GATCACATTG AAGGGATTCT GATGGCGAAA
GACTTGCTGC CGTTTATGCG CAGCGATGCT GAAGCCTTCA GCATGGACAA AGTGTTACGT
CAGGCGGTTG TCGTTCCTGA AAGTAAGCGC GTAGACCGGA TGCTGAAAGA GTTTCGCTCT
CAGCGTTACC ACATGGCGAT CGTTATTGAC GAATTCGGTG GGGTTTCCGG TCTGGTGACC
ATTGAAGACA TCCTGGAACT GATTGTTGGT GAGATTGAAG ACGAGTATGA CGAAGAAGAT
GATATCGACT TCCGTCAGCT GAGTCGTCAT ACCTGGACCG TACGCGCACT GGCTTCCATT
GAAGACTTCA ACGAAGCGTT CGGCACCCAC TTTAGCGATG AAGAAGTCGA CACTATCGGT
GGTCTGGTGA TGCAGGCATT TGGGCATCTT CCGGCGCGTG GCGAAACTAT CGACATCGAC
GGTTACCAGT TCAAAGTGGC GATGGCCGAC AGTCGGCGTA TTATTCAGGT TCATGTCAAA
ATCCCGGATG ACTCACCCCA GCCGAAGCTG GATGAATAA
 
Protein sequence
MSDDNSHSSD TISNKKGFFS LLLSQLFHGE PKNRDELLAL IRDSGQNDLI DEDTRDMLEG 
VMDIADQRVR DIMIPRSQMI TLKRNQTLDE CLDVIIESAH SRFPVISEDK DHIEGILMAK
DLLPFMRSDA EAFSMDKVLR QAVVVPESKR VDRMLKEFRS QRYHMAIVID EFGGVSGLVT
IEDILELIVG EIEDEYDEED DIDFRQLSRH TWTVRALASI EDFNEAFGTH FSDEEVDTIG
GLVMQAFGHL PARGETIDID GYQFKVAMAD SRRIIQVHVK IPDDSPQPKL DE