Gene EcDH1_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2965 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3186164 
End bp3187588 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content54% 
IMG OID 
ProducttRNA-i(6)A37 thiotransferase enzyme MiaB 
Protein accessionACX40594 
Protein GI260450172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00048321 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAA AACTCCATAT TAAAACCTGG GGCTGTCAGA TGAACGAGTA CGATTCATCG 
AAGATGGCCG ATCTGCTGGA TGCCACCCAC GGCTATCAAC TGACCGACGT GGCGGAAGAA
GCGGATGTGC TGCTGCTGAA CACCTGCTCA ATCCGCGAGA AGGCTCAGGA AAAAGTCTTC
CATCAGTTGG GTCGCTGGAA ACTGTTAAAA GAGAAGAATC CAGACCTGAT TATCGGCGTC
GGTGGCTGCG TGGCATCGCA AGAAGGCGAG CACATTCGCC AGCGCGCCCA CTATGTCGAT
ATTATTTTTG GGCCGCAAAC GCTGCACCGT CTGCCGGAGA TGATCAACTC CGTGCGTGGC
GACCGCAGCC CGGTTGTAGA TATCAGCTTC CCGGAAATCG AGAAGTTTGA CCGTCTACCG
GAACCGCGCG CCGAAGGGCC GACCGCGTTT GTCTCCATCA TGGAAGGCTG CAATAAATAT
TGCACCTACT GCGTGGTGCC TTACACCCGT GGTGAAGAGG TAAGCCGTCC GTCCGACGAT
ATTCTGTTTG AGATTGCCCA GCTTGCGGCT CAGGGCGTGC GTGAAGTCAA CCTGCTCGGT
CAGAACGTGA ACGCCTGGCG TGGTGAAAAC TACGACGGCA CCACCGGATC GTTTGCCGAT
CTGCTGCGTC TGGTTGCTGC GATCGACGGG ATCGATCGTA TTCGCTTTAC CACCAGCCAT
CCGATCGAAT TCACCGACGA TATCATCGAA GTGTATCGCG ACACGCCGGA GCTGGTGAGC
TTCCTGCATC TGCCGGTACA GAGCGGTTCC GATCGCATTC TGAACCTGAT GGGCCGTACC
CATACGGCGC TGGAGTACAA AGCGATCATC CGTAAACTGC GTGCGGCGCG TCCAGATATT
CAGATCAGTT CTGATTTCAT CGTTGGCTTC CCTGGCGAAA CCACCGAAGA CTTCGAGAAA
ACGATGAAGC TGATTGCCGA CGTCAATTTC GACATGAGCT ACAGCTTTAT CTTCTCTGCA
CGTCCGGGTA CACCAGCCGC CGATATGGTT GATGATGTTC CGGAAGAAGA GAAGAAGCAG
CGTCTGTATA TTCTGCAAGA GCGCATTAAT CAGCAAGCGA TGGCGTGGAG CCGCCGGATG
CTCGGCACCA CCCAGCGTAT TCTGGTAGAA GGTACATCGC GTAAGAGCAT CATGGAGCTT
TCCGGGCGTA CGGAAAATAA CCGCGTGGTC AACTTCGAAG GCACGCCGGA TATGATCGGT
AAATTCGTCG ATGTAGAAAT TACCGACGTC TACCCGAACT CTCTGCGCGG TAAAGTGGTG
CGTACTGAAG ATGAAATGGG TCTGCGCGTG GCAGAAACAC CGGAATCAGT GATTGCCCGT
ACCCGCAAAG AAAACGACCT TGGCGTGGGT TATTATCAGC CGTAA
 
Protein sequence
MTKKLHIKTW GCQMNEYDSS KMADLLDATH GYQLTDVAEE ADVLLLNTCS IREKAQEKVF 
HQLGRWKLLK EKNPDLIIGV GGCVASQEGE HIRQRAHYVD IIFGPQTLHR LPEMINSVRG
DRSPVVDISF PEIEKFDRLP EPRAEGPTAF VSIMEGCNKY CTYCVVPYTR GEEVSRPSDD
ILFEIAQLAA QGVREVNLLG QNVNAWRGEN YDGTTGSFAD LLRLVAAIDG IDRIRFTTSH
PIEFTDDIIE VYRDTPELVS FLHLPVQSGS DRILNLMGRT HTALEYKAII RKLRAARPDI
QISSDFIVGF PGETTEDFEK TMKLIADVNF DMSYSFIFSA RPGTPAADMV DDVPEEEKKQ
RLYILQERIN QQAMAWSRRM LGTTQRILVE GTSRKSIMEL SGRTENNRVV NFEGTPDMIG
KFVDVEITDV YPNSLRGKVV RTEDEMGLRV AETPESVIAR TRKENDLGVG YYQP