Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2963 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 3181942 |
End bp | 3183606 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | ACX40592 |
Protein GI | 260450170 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000235931 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTTCAA TTTTTGGCGT ATTCGATATC AAAACAGACG CAGTTGAGCT GCGTAAGAAA GCCCTCGAGC TGTCACGCCT GATGCGTCAT CGTGGCCCGG ACTGGTCCGG TATTTATGCC AGCGATAACG CCATTCTCGC CCACGAACGT CTGTCAATTG TTGACGTTAA CGCGGGGGCG CAACCTCTCT ACAACCAACA AAAAACCCAC GTACTGGCGG TAAACGGTGA AATCTACAAC CACCAGGCAT TGCGCGCCGA ATATGGCGAT CGTTACCAGT TCCAGACCGG GTCTGACTGT GAAGTGATCC TCGCGCTGTA TCAGGAAAAA GGGCCGGAAT TTCTCGACGA CTTGCAGGGC ATGTTTGCCT TTGCACTGTA CGACAGCGAA AAAGATGCCT ACCTGATTGG TCGCGACCAT CTGGGGATCA TCCCACTGTA TATGGGGTAT GACGAACACG GTCAGCTGTA TGTGGCCTCA GAAATGAAAG CGCTGGTGCC AGTTTGCCGC ACGATTAAAG AGTTCCCGGC GGGGAGCTAT TTGTGGAGCC AGGACGGCGA AATCCGTTCT TACTATCATC GCGACTGGTT CGACTACGAT GCGGTGAAAG ATAACGTGAC CGACAAAAAC GAGCTGCGTC AGGCACTGGA AGATTCAGTT AAAAGCCATC TGATGTCTGA TGTGCCTTAC GGTGTGCTGC TTTCTGGTGG TCTGGATTCC TCAATTATTT CCGCTATCAC CAAGAAATAC GCAGCCCGTC GCGTGGAAGA TCAGGAACGC TCTGAAGCCT GGTGGCCGCA GTTACACTCC TTTGCTGTAG GTCTGCCGGG TTCACCGGAT CTGAAAGCAG CCCAGGAAGT GGCAAACCAT CTGGGCACGG TGCATCACGA AATTCACTTC ACTGTACAGG AAGGTCTGGA TGCCATCCGC GACGTGATTT ACCACATCGA AACTTATGAT GTGACCACTA TTCGCGCTTC AACACCGATG TATTTAATGT CGCGTAAGAT CAAGGCGATG GGCATTAAAA TGGTGCTGTC CGGTGAAGGT TCTGATGAAG TGTTCGGCGG TTATCTTTAC TTCCACAAAG CACCGAATGC CAAAGAACTG CATGAAGAGA CGGTGCGTAA ACTGCTGGCC CTGCATATGT ATGACTGCGC GCGTGCCAAC AAAGCGATGT CAGCCTGGGG CGTGGAAGCA CGCGTTCCGT TCCTCGACAA AAAATTCCTT GATGTGGCGA TGCGTATTAA CCCACAGGAT AAAATGTGCG GTAACGGCAA AATGGAAAAA CACATCCTGC GTGAATGTTT TGAAGCGTAT CTGCCTGCAA GCGTGGCCTG GCGGCAGAAA GAGCAGTTCT CCGATGGCGT CGGTTACAGT TGGATCGACA CCCTGAAAGA AGTGGCTGCG CAGCAGGTTT CTGATCAGCA ACTGGAAACT GCCCGCTTCC GCTTCCCGTA CAACACGCCA ACCTCTAAAG AAGCGTACTT GTATCGGGAG ATCTTTGAAG AACTATTCCC GCTTCCGAGC GCCGCTGAGT GCGTGCCGGG CGGTCCTTCC GTCGCTTGTT CTTCCGCTAA AGCGATCGAA TGGGATGAAG CGTTCAAGAA AATGGACGAT CCGTCTGGTC GCGCGGTTGG TGTTCACCAG TCGGCGTATA AGTAA
|
Protein sequence | MCSIFGVFDI KTDAVELRKK ALELSRLMRH RGPDWSGIYA SDNAILAHER LSIVDVNAGA QPLYNQQKTH VLAVNGEIYN HQALRAEYGD RYQFQTGSDC EVILALYQEK GPEFLDDLQG MFAFALYDSE KDAYLIGRDH LGIIPLYMGY DEHGQLYVAS EMKALVPVCR TIKEFPAGSY LWSQDGEIRS YYHRDWFDYD AVKDNVTDKN ELRQALEDSV KSHLMSDVPY GVLLSGGLDS SIISAITKKY AARRVEDQER SEAWWPQLHS FAVGLPGSPD LKAAQEVANH LGTVHHEIHF TVQEGLDAIR DVIYHIETYD VTTIRASTPM YLMSRKIKAM GIKMVLSGEG SDEVFGGYLY FHKAPNAKEL HEETVRKLLA LHMYDCARAN KAMSAWGVEA RVPFLDKKFL DVAMRINPQD KMCGNGKMEK HILRECFEAY LPASVAWRQK EQFSDGVGYS WIDTLKEVAA QQVSDQQLET ARFRFPYNTP TSKEAYLYRE IFEELFPLPS AAECVPGGPS VACSSAKAIE WDEAFKKMDD PSGRAVGVHQ SAYK
|
| |