Gene EcDH1_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2960 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3178368 
End bp3179516 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content52% 
IMG OID 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionACX40589 
Protein GI260450167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.256042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGCAT TAACCCAGGG CCGGATCTTT ACCGGCCACG AATTTCTTGA TGACCACGCG 
GTTGTTATCG CTGATGGCCT GATTAAAAGC GTCTGTCCGG TAGCGGAACT GCCGCCAGAG
ATCGAACAAC GTTCACTGAA CGGGGCCATT CTCTCCCCCG GTTTTATCGA TGTGCAGTTA
AACGGCTGCG GCGGCGTACA GTTTAACGAC ACCGCTGAAG CGGTCAGCGT GGAAACGCTG
GAAATCATGC AGAAAGCCAA TGAGAAATCA GGCTGTACTA ACTATCTGCC GACGCTTATC
ACCACCAGCG ATGAGCTGAT GAAACAGGGC GTGCGCGTTA TGCGCGAGTA CCTGGCAAAA
CATCCGAATC AGGCGTTAGG TCTGCATCTG GAAGGTCCGT GGCTGAATCT GGTAAAAAAA
GGCACCCATA ATCCGAATTT TGTGCGTAAG CCTGATGCCG CGCTGGTCGA TTTCCTGTGT
GAAAACGCCG ACGTCATTAC CAAAGTGACC CTGGCACCGG AAATGGTTCC TGCGGAAGTC
ATCAGCAAAC TGGCAAATGC CGGGATTGTG GTTTCTGCCG GTCACTCCAA CGCGACGTTG
AAAGAAGCAA AAGCCGGTTT CCGCGCGGGG ATTACCTTTG CCACCCATCT GTACAACGCG
ATGCCGTATA TTACCGGTCG TGAACCTGGC CTGGCGGGCG CGATCCTCGA CGAAGCTGAC
ATTTATTGCG GTATTATTGC TGATGGCCTG CATGTTGATT ACGCCAACAT TCGCAACGCT
AAACGTCTGA AAGGCGACAA ACTGTGTCTG GTTACTGACG CCACCGCGCC AGCAGGTGCC
AACATTGAAC AGTTCATTTT TGCGGGTAAA ACAATATACT ACCGTAACGG ACTTTGTGTG
GATGAGAACG GTACGTTAAG CGGTTCATCC TTAACCATGA TTGAAGGCGT GCGTAATCTG
GTCGAACATT GCGGTATCGC ACTGGATGAA GTGCTACGTA TGGCGACGCT CTATCCGGCG
CGTGCGATTG GCGTTGAGAA ACGTCTCGGC ACACTCGCCG CAGGTAAAGT AGCCAACCTG
ACTGCATTCA CACCTGATTT TAAAATCACC AAGACCATCG TTAACGGTAA CGAGGTCGTA
ACTCAATAA
 
Protein sequence
MYALTQGRIF TGHEFLDDHA VVIADGLIKS VCPVAELPPE IEQRSLNGAI LSPGFIDVQL 
NGCGGVQFND TAEAVSVETL EIMQKANEKS GCTNYLPTLI TTSDELMKQG VRVMREYLAK
HPNQALGLHL EGPWLNLVKK GTHNPNFVRK PDAALVDFLC ENADVITKVT LAPEMVPAEV
ISKLANAGIV VSAGHSNATL KEAKAGFRAG ITFATHLYNA MPYITGREPG LAGAILDEAD
IYCGIIADGL HVDYANIRNA KRLKGDKLCL VTDATAPAGA NIEQFIFAGK TIYYRNGLCV
DENGTLSGSS LTMIEGVRNL VEHCGIALDE VLRMATLYPA RAIGVEKRLG TLAAGKVANL
TAFTPDFKIT KTIVNGNEVV TQ