Gene EcDH1_2944 details

Gene Information

• Locus tag: EcDH1_2944
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 3160659
• End bp: 3162857
• Gene Length: 2199 bp
• Protein Length: 732 aa
• Translation table: 11
• GC content: 49%
• Product: Ornithine decarboxylase
• Protein accession: ACX40575
• Protein GI: 260450153

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAAT TAAAAATTGC GGTTAGTGAT TCTTGCCCGG ACTGTTTTAC CACGCAGCGA 
GAATGTATCT ACATTAATGA AAGTCGTAAT ATCGATGTGG CGGCAATAGT TTTATCGCTC 
AACGATGTTA CATGCGGAAA ACTCGATGAA ATCGATGCCA CGGGTTATGG CATCCCGGTA 
TTTATTGCTA CTGAAAATCA AGAACGTGTA CCCGCAGAGT ATTTGCCCCG TATTTCGGGT 
GTCTTTGAGA ATTGCGAATC GCGACGAGAA TTTTATGGTC GCCAGTTAGA AACCGCTGCC 
AGCCATTATG AAACTCAACT GCGCCCACCT TTCTTCCGCG CACTGGTCGA TTATGTCAAT 
CAAGGTAACA GCGCGTTTGA TTGCCCTGGT CATCAGGGCG GCGAATTTTT CCGTCGCCAT 
CCGGCGGGGA ATCAGTTTGT GGAATACTTT GGTGAGGCGC TGTTCCGTGC CGACTTGTGC 
AACGCCGACG TAGCGATGGG CGATCTGCTG ATTCACGAAG GCGCGCCATG CATTGCACAG 
CAACATGCGG CAAAAGTGTT TAATGCCGAT AAAACCTACT TCGTTTTAAA TGGCACTTCA 
TCTTCTAACA AAGTGGTTTT AAACGCCCTG CTAACACCGG GTGATCTGGT GCTGTTTGAT 
CGCAATAACC ACAAATCTAA CCACCACGGA GCGTTGCTAC AGGCTGGTGC AACACCGGTT 
TATCTGGAAA CGGCACGTAA CCCGTATGGC TTTATCGGTG GCATTGATGC GCACTGTTTT 
GAAGAAAGTT ACCTGCGTGA GCTGATCGCG GAAGTCGCAC CGCAGCGGGC AAAAGAGGCT 
CGTCCTTTCC GCCTCGCTGT GATTCAGTTA GGCACCTACG ACGGTACGAT TTATAACGCC 
CGCCAAGTGG TGGATAAAAT TGGTCATCTG TGTGACTACA TCCTGTTTGA CTCAGCATGG 
GTCGGCTATG AACAGTTTAT TCCGATGATG GCGGACTGTT CGCCGCTGTT GCTGGATCTT 
AATGAGAACG ATCCGGGTAT TCTGGTTACG CAATCTGTGC ATAAACAACA GGCTGGTTTT 
TCTCAGACTT CACAAATTCA TAAAAAAGAC AGCCACATCA AAGGGCAACA GCGTTATGTA 
CCGCACAAAC GCATGAACAA CGCCTTTATG ATGCACGCCT CCACCAGCCC GTTCTATCCG 
CTGTTTGCCG CACTGAATAT CAACGCCAAA ATGCATGAAG GTGTCAGCGG TCGTAATATG 
TGGATGGATT GTGTGGTAAA TGGCATTAAT GCCCGCAAAC TGATCCTCGA TAACTGTCAG 
CATATTCGTC CGTTCGTACC TGAACTGGTG GATGGTAAAC CCTGGCAGTC GTATGAAACA 
GCGCAAATTG CGGTTGATCT GCGCTTCTTC CAGTTTGTAC CAGGGGAACA CTGGCATTCT 
TTTGAAGGCT ATGCAGAGAA TCAATACTTT GTCGATCCAT GCAAACTGTT GCTGACAACC 
CCAGGTATTG ATGCACGTAA CGGCGAATAT GAAGCGTTCG GTGTACCCGC GACGATTCTT 
GCTAACTTCC TGCGCGAAAA TGGCGTAGTG CCGGAAAAAT GCGATCTTAA CTCCATCCTC 
TTCCTGCTGA CTCCGGCAGA AGATATGGCC AAACTTCAGC AACTTGTTGC CCTGCTGGTA 
CGCTTCGAAA AACTGCTTGA GTCCGACGCG CCATTAGCAG AAGTGCTACC TTCCATCTAC 
AAACAGCATG AAGAGCGCTA CGCCGGTTAT ACCCTGCGTC AGTTGTGTCA GGAAATGCAT 
GATTTGTATG CCCGCCACAA CGTGAAACAA CTGCAAAAAG AGATGTTCCG TAAGGAGCAC 
TTCCCACGCG TCAGCATGAA TCCGCAAGAA GCCAACTACG CCTATTTACG CGGTGAAGTG 
GAACTGGTTC GTCTGCCGGA TGCAGAAGGC CGTATCGCTG CCGAAGGTGC GCTTCCTTAT 
CCTCCGGGTG TGCTGTGTGT TGTTCCGGGT GAAATCTGGG GTGGTGCTGT TCTGCGTTAC 
TTCAGCGCTC TGGAAGAAGG GATCAACCTG CTGCCAGGTT TTGCACCGGA GCTGCAGGGT 
GTCTATATCG AAGAACATGA TGGTCGTAAG CAAGTTTGGT GCTATGTCAT CAAGCCTCGT 
GATGCGCAAA GCACCCTGTT GAAAGGGGAA AAATTATGA 

 

Protein sequence

MSKLKIAVSD SCPDCFTTQR ECIYINESRN IDVAAIVLSL NDVTCGKLDE IDATGYGIPV 
FIATENQERV PAEYLPRISG VFENCESRRE FYGRQLETAA SHYETQLRPP FFRALVDYVN 
QGNSAFDCPG HQGGEFFRRH PAGNQFVEYF GEALFRADLC NADVAMGDLL IHEGAPCIAQ 
QHAAKVFNAD KTYFVLNGTS SSNKVVLNAL LTPGDLVLFD RNNHKSNHHG ALLQAGATPV 
YLETARNPYG FIGGIDAHCF EESYLRELIA EVAPQRAKEA RPFRLAVIQL GTYDGTIYNA 
RQVVDKIGHL CDYILFDSAW VGYEQFIPMM ADCSPLLLDL NENDPGILVT QSVHKQQAGF 
SQTSQIHKKD SHIKGQQRYV PHKRMNNAFM MHASTSPFYP LFAALNINAK MHEGVSGRNM 
WMDCVVNGIN ARKLILDNCQ HIRPFVPELV DGKPWQSYET AQIAVDLRFF QFVPGEHWHS 
FEGYAENQYF VDPCKLLLTT PGIDARNGEY EAFGVPATIL ANFLRENGVV PEKCDLNSIL 
FLLTPAEDMA KLQQLVALLV RFEKLLESDA PLAEVLPSIY KQHEERYAGY TLRQLCQEMH 
DLYARHNVKQ LQKEMFRKEH FPRVSMNPQE ANYAYLRGEV ELVRLPDAEG RIAAEGALPY 
PPGVLCVVPG EIWGGAVLRY FSALEEGINL LPGFAPELQG VYIEEHDGRK QVWCYVIKPR 
DAQSTLLKGE KL