Gene EcDH1_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2934 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3145466 
End bp3146899 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content55% 
IMG OID 
ProductRHS protein 
Protein accessionACX40565 
Protein GI260450143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.375887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCCGG ATAACCGTAT CGCCCGTGAC GCGCACTATC TTTACCGGTA TGACCGTCAC 
GGCAGGCTGA CGGAGAAAAC CGACCTCATC CCGGAAGGGG TTATCCGCAC GGATGATGAG
CGCACCCACC GGTACCATTA CGACAGTCAG CACCGGCTGG TGCACTACAC GCGGACACAA
TATGCAGAGC CGCTGGTCGA AAGCCGCTAT CTTTACGACC CGCTGGGCCG CAGGGTGGCA
AAACGGGTGT GGCGACGTGA ACGGGACCTG ACGGGCTGGA TGTCGCTGTC ACGGAAACCG
CAAGTGACCT GGTACGGCTG GGACGGCGAC CGCCTGACCA CGATACAGAA CGACAGAACC
CGCATCCAGA CGATTTATCA GCCGGGGAGC TTCACGCCAC TCATCAGGGT TGAAACCGCC
ACCGGTGAGC TGGCGAAAAC GCAGCGCCGC AGCCTGGCGG ATACCCTTCA GCAGTCCGGC
GGCGAAGACG GTGGCAGTGT GGTGTTCCCG CCGGTGCTGG TGCAGATGCT CGACCGGCTG
GAAAGTGAAA TCCTGGCTGA CCGGGTGAGT GAGGAAAGCC GCCGCTGGCT GGCATCGTGC
GGCCTGACGG TGGAGCAGAT GCAAAACCAG ATGGACCCGG TGTACACGCC GGCGCGAAAA
ATCCACCTGT ACCACTGCGA CCATCGCGGC CTGCCGCTGG CGCTTGTCAG CACGGAAGGG
GCAACAGAAT GGTGCGCAGA ATACGATGAA TGGGGCAACC TGCTGAATGA AGAGAACCCG
CATCAGCTGC AGCAGCTTAT CCGCCTGCCG GGGCAGCAGT ATGATGAGGA GTCCGGCCTG
TATTACAACC GCCACCGCTA TTATGACCCG CTGCAGGGGA GGTATATCAC TCAGGATCCG
ATTGGGCTGA AGGGGGGATG GAATTTTTAT CAGTATCCGC TGAATCCGGT TCAGTATATA
GATTCAATGG GACTGGCATC AAAATATGGA CACTTAAATA ATGGCGGATA TGGAGCGAGA
CCCAACAAAC CGCCTACGCC CGATCCAAGT AAATTGCCGG ACATAGCGAA ACAATTAAGA
CTGCCATATC CTATTGACCA GGCCAGTAGT GCGCCTAATG TTTTCAAAAC ATTCTTCAGA
GCATTAAGCC CTTACGACTA CACACTGTAT TGCAGGAAGT GGGTAAAACC AAATCTGACT
TGTACGCCAC AGGATGATTC CCAGTATCCA GGGATGGATA CAAAGACAGC AAGTGATTAC
CTGCCACAGA CAAATTGGCC AACAACTCAA TTACCACCAG GATATACTTG TGCAGAACCC
TATTTATTCC CAGACATTAA TAAACCCGAT GGGCCAGCAA CAGCAGGGAT AGATGATTTG
GGTGAAATTT TAGCTAAGAT GAAACAGAGA ACATCGAGAG GAATAAGAAA ATGA
 
Protein sequence
MWPDNRIARD AHYLYRYDRH GRLTEKTDLI PEGVIRTDDE RTHRYHYDSQ HRLVHYTRTQ 
YAEPLVESRY LYDPLGRRVA KRVWRRERDL TGWMSLSRKP QVTWYGWDGD RLTTIQNDRT
RIQTIYQPGS FTPLIRVETA TGELAKTQRR SLADTLQQSG GEDGGSVVFP PVLVQMLDRL
ESEILADRVS EESRRWLASC GLTVEQMQNQ MDPVYTPARK IHLYHCDHRG LPLALVSTEG
ATEWCAEYDE WGNLLNEENP HQLQQLIRLP GQQYDEESGL YYNRHRYYDP LQGRYITQDP
IGLKGGWNFY QYPLNPVQYI DSMGLASKYG HLNNGGYGAR PNKPPTPDPS KLPDIAKQLR
LPYPIDQASS APNVFKTFFR ALSPYDYTLY CRKWVKPNLT CTPQDDSQYP GMDTKTASDY
LPQTNWPTTQ LPPGYTCAEP YLFPDINKPD GPATAGIDDL GEILAKMKQR TSRGIRK