Gene EcDH1_2930 details

Gene Information

• Locus tag: EcDH1_2930
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: -
• Start bp: 3142266
• End bp: 3143027
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 40%
• Product: transposase IS4 family protein
• Protein accession: ACX40563
• Protein GI: 260450141

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTTA AAAAATTGAT GGAACATATT TCTATTATCC CCGATTACAG ACAAGCCTGG 
AAAGTGGAAC ATAAATTATC GGATATTCTA CTGTTGACTA TTTGTGCCGT TATTTCTGGT 
GCAGAAGGCT GGGAAGATAT AGAGGATTTT GGGGAAACAC ATCCCGATTT TTTGAAGCAA 
TATGGTGATT TTGAAAATGG TATTCCTGTT CACGATACCA TTGCCAGAGT TGTATCCTGT 
ATCTGTCCTG CGAAATTTCA TGAGAGCTTT ATTAACTGGA TGCTTGACTA CCATTCTTCA 
GATGATAAAG ACGTCATCGC AATTGATGGA AAAATACACC GGCATTCTTA TGACAAGAGT 
CGCCGTAAGG GAGCGATTCA TGTCATTAGT GCGTTCTCAA CAATGCACAG TCTGGTCATC 
GGACAGATCA AGACGGATAA GAAATCCAAT GAGATCACAG CTATCCCTGA ACTTCTTAAC 
ATGCTGGATA TTAAAGGAAA AATCATCAAA ACCGATGCGA TGGGTTGCCA GAAAGATATT 
GCAGAGAAGA TACAAAAACA GGGAGGTGAT TATTTATTCG CTGTAAAAGG AAACCAGGGG 
CGGCTAAATA AAGCCTTCGA GGAAAAATTT CCGCTGAAAG AATTAAATAA TCCCAAGCAT 
GACAGTTACG CAATTAGTGA AAAGAGTCAC GGCAGAGAAG AAACCCGTCT TCATATTGTT 
TGCGATGTCC CTGATGAGCT TATTGATTTC ACGTTTGAAT AG 

 

Protein sequence

MELKKLMEHI SIIPDYRQAW KVEHKLSDIL LLTICAVISG AEGWEDIEDF GETHPDFLKQ 
YGDFENGIPV HDTIARVVSC ICPAKFHESF INWMLDYHSS DDKDVIAIDG KIHRHSYDKS 
RRKGAIHVIS AFSTMHSLVI GQIKTDKKSN EITAIPELLN MLDIKGKIIK TDAMGCQKDI 
AEKIQKQGGD YLFAVKGNQG RLNKAFEEKF PLKELNNPKH DSYAISEKSH GREETRLHIV 
CDVPDELIDF TFE