| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2928 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3140194 |
|---|
| End bp | 3141612 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | Deoxyribodipyrimidine photo-lyase |
|---|
| Protein accession | ACX40561 |
|---|
| Protein GI | 260450139 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCC ATCTGGTCTG GTTTCGCCAG GATTTACGTC TGCACGATAA TCTCGCACTG
GCTGCCGCCT GCCGCAATTC GTCTGCACGC GTGCTGGCGT TGTATATCGC TACACCACGC
CAGTGGGCGA CGCATAACAT GTCGCCGCGT CAGGCTGAAC TTATCAATGC TCAACTGAAT
GGGCTACAAA TAGCGCTTGC GGAAAAAGGT ATTCCTTTAT TGTTCCGTGA AGTGGATGAC
TTTGTCGCCA GTGTCGAAAT AGTTAAACAG GTGTGCGCGG AAAACAGCGT TACCCACCTG
TTTTATAACT ATCAGTATGA AGTGAATGAG CGGGCGCGGG ATGTGGAAGT TGAAAGAGCG
CTGCGTAACG TGGTGTGTGA AGGATTTGAT GACAGCGTGA TCCTGCCGCC TGGCGCGGTG
ATGACCGGTA ATCACGAGAT GTACAAAGTC TTTACGCCTT TTAAGAATGC CTGGCTGAAA
CGGCTGCGGG AAGGGATGCC GGAGTGCGTC GCTGCGCCAA AAGTTCGTAG TAGCGGATCG
ATAGAGCCCT CGCCATCCAT TACGCTGAAT TATCCTCGTC AGTCTTTCGA TACTGCGCAT
TTTCCGGTGG AAGAAAAAGC GGCGATTGCG CAATTACGCC AGTTTTGCCA GAACGGTGCC
GGAGAATATG AGCAACAACG AGATTTTCCG GCAGTGGAAG GCACCAGCCG TTTGTCGGCC
AGCCTGGCAA CGGGCGGGTT ATCGCCTCGC CAGTGCTTGC ATCGCTTGTT GGCTGAACAG
CCGCAGGCGC TGGACGGTGG GGCCGGTAGT GTCTGGCTTA ATGAGCTGAT CTGGCGCGAG
TTTTACCGTC ACCTGATAAC GTATCACCCC TCGTTGTGTA AACATCGTCC ATTTATTGCC
TGGACGGATC GTGTACAGTG GCAGAGCAAT CCCGCACATT TACAGGCCTG GCAGGAAGGC
AAAACGGGAT ACCCGATTGT TGATGCCGCT ATGCGTCAGC TTAACAGCAC TGGCTGGATG
CATAACAGGC TACGGATGAT TACAGCCAGT TTTCTGGTGA AAGATTTATT GATCGACTGG
CGCGAAGGCG AGCGATATTT CATGTCGCAG CTGATTGATG GTGATTTGGC AGCCAATAAC
GGTGGCTGGC AGTGGGCCGC TTCAACCGGA ACCGATGCAG CGCCGTATTT TCGTATTTTC
AACCCGACAA CCCAGGGCGA GAAATTTGAT CATGAGGGCG AGTTTATCCG CCAGTGGCTA
CCGGAACTGC GCGATGTGCC AGGGAAAGTG GTGCATGAGC CGTGGAAGTG GGCGCAGAAA
GCAGGTGTGA CGCTGGATTA TCCGCAACCG ATAGTCGAGC ACAAAGAAGC GAGAGTACAA
ACGTTGGCAG CGTATGAGGC GGCGCGGAAG GGGAAATAA
|
|---|
| Protein sequence | MTTHLVWFRQ DLRLHDNLAL AAACRNSSAR VLALYIATPR QWATHNMSPR QAELINAQLN
GLQIALAEKG IPLLFREVDD FVASVEIVKQ VCAENSVTHL FYNYQYEVNE RARDVEVERA
LRNVVCEGFD DSVILPPGAV MTGNHEMYKV FTPFKNAWLK RLREGMPECV AAPKVRSSGS
IEPSPSITLN YPRQSFDTAH FPVEEKAAIA QLRQFCQNGA GEYEQQRDFP AVEGTSRLSA
SLATGGLSPR QCLHRLLAEQ PQALDGGAGS VWLNELIWRE FYRHLITYHP SLCKHRPFIA
WTDRVQWQSN PAHLQAWQEG KTGYPIVDAA MRQLNSTGWM HNRLRMITAS FLVKDLLIDW
REGERYFMSQ LIDGDLAANN GGWQWAASTG TDAAPYFRIF NPTTQGEKFD HEGEFIRQWL
PELRDVPGKV VHEPWKWAQK AGVTLDYPQP IVEHKEARVQ TLAAYEAARK GK
|
|---|
| |