Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2922 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 3134393 |
End bp | 3135184 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | ACX40555 |
Protein GI | 260450133 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.195677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAG GCCCGGAGAT CCGCCGTGCA GCGGATAACC TGGAGGCGGC GATCAAAGGC AAACCACTAA CTGATGTCTG GTTTGCCTTC CCGCAGTTAA AACCTTATCA ATCACAACTT ATCGGTCAAC ACGTTACCCA TGTGGAAACG CGTGGTAAGG CGTTGTTAAC TCATTTTTCC AACGACTTAA CGCTCTACAG CCATAATCAG CTTTACGGCG TCTGGCGCGT GGTTGATACC GGCGAAGAGC CGCAGACCAC GCGAGTATTG CGGGTAAAAC TGCAAACGGC TGACAAAACC ATTCTGCTTT ATAGCGCCTC GGATATTGAG ATGTTGACCC CGGAACAACT GACCACGCAT CCGTTTTTAC AACGCGTTGG TCCCGATGTG CTGGATCCGA ATCTGACGCC GGAGGTGGTG AAAGAACGAT TATTGTCGCC GCGCTTTCGT AACCGTCAGT TTGCTGGATT ACTGCTCGAT CAGGCGTTTC TGGCTGGGCT TGGCAATTAT TTGCGGGTGG AGATCCTCTG GCAGGTTGGG TTGACTGGAA ATCATAAAGC GAAAGATCTC AATGCGGCGC AACTGGATGC ACTCGCACAC GCGTTACTGG AGATTCCTCG ATTTTCCTAC GCTACGCGGG GGCAGGTGGA TGAGAATAAG CATCATGGGG CGCTGTTTCG CTTTAAGGTT TTTCATCGAG ATGGCGAACC GTGCGAACGT TGTGGCAGCA TCATTGAGAA AACCACGCTG TCATCTCGCC CGTTTTACTG GTGCCCTGGC TGCCAGCACT AG
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Protein sequence | MPEGPEIRRA ADNLEAAIKG KPLTDVWFAF PQLKPYQSQL IGQHVTHVET RGKALLTHFS NDLTLYSHNQ LYGVWRVVDT GEEPQTTRVL RVKLQTADKT ILLYSASDIE MLTPEQLTTH PFLQRVGPDV LDPNLTPEVV KERLLSPRFR NRQFAGLLLD QAFLAGLGNY LRVEILWQVG LTGNHKAKDL NAAQLDALAH ALLEIPRFSY ATRGQVDENK HHGALFRFKV FHRDGEPCER CGSIIEKTTL SSRPFYWCPG CQH
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