Gene EcDH1_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2922 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3134393 
End bp3135184 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content52% 
IMG OID 
ProductDNA-(apurinic or apyrimidinic site) lyase 
Protein accessionACX40555 
Protein GI260450133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.195677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAG GCCCGGAGAT CCGCCGTGCA GCGGATAACC TGGAGGCGGC GATCAAAGGC 
AAACCACTAA CTGATGTCTG GTTTGCCTTC CCGCAGTTAA AACCTTATCA ATCACAACTT
ATCGGTCAAC ACGTTACCCA TGTGGAAACG CGTGGTAAGG CGTTGTTAAC TCATTTTTCC
AACGACTTAA CGCTCTACAG CCATAATCAG CTTTACGGCG TCTGGCGCGT GGTTGATACC
GGCGAAGAGC CGCAGACCAC GCGAGTATTG CGGGTAAAAC TGCAAACGGC TGACAAAACC
ATTCTGCTTT ATAGCGCCTC GGATATTGAG ATGTTGACCC CGGAACAACT GACCACGCAT
CCGTTTTTAC AACGCGTTGG TCCCGATGTG CTGGATCCGA ATCTGACGCC GGAGGTGGTG
AAAGAACGAT TATTGTCGCC GCGCTTTCGT AACCGTCAGT TTGCTGGATT ACTGCTCGAT
CAGGCGTTTC TGGCTGGGCT TGGCAATTAT TTGCGGGTGG AGATCCTCTG GCAGGTTGGG
TTGACTGGAA ATCATAAAGC GAAAGATCTC AATGCGGCGC AACTGGATGC ACTCGCACAC
GCGTTACTGG AGATTCCTCG ATTTTCCTAC GCTACGCGGG GGCAGGTGGA TGAGAATAAG
CATCATGGGG CGCTGTTTCG CTTTAAGGTT TTTCATCGAG ATGGCGAACC GTGCGAACGT
TGTGGCAGCA TCATTGAGAA AACCACGCTG TCATCTCGCC CGTTTTACTG GTGCCCTGGC
TGCCAGCACT AG
 
Protein sequence
MPEGPEIRRA ADNLEAAIKG KPLTDVWFAF PQLKPYQSQL IGQHVTHVET RGKALLTHFS 
NDLTLYSHNQ LYGVWRVVDT GEEPQTTRVL RVKLQTADKT ILLYSASDIE MLTPEQLTTH
PFLQRVGPDV LDPNLTPEVV KERLLSPRFR NRQFAGLLLD QAFLAGLGNY LRVEILWQVG
LTGNHKAKDL NAAQLDALAH ALLEIPRFSY ATRGQVDENK HHGALFRFKV FHRDGEPCER
CGSIIEKTTL SSRPFYWCPG CQH