Gene EcDH1_2921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2921 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3133350 
End bp3134396 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content56% 
IMG OID 
Productmembrane protein AbrB duplication 
Protein accessionACX40554 
Protein GI260450132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.506523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTTT TGCAGTGGGG AATGTTATGT GTGCTATCAC TTCTCCTTTC TATTGGTTTC 
CTCGCGGTAC ATCTCCCGGC GGCGCTATTA CTTGGGCCGA TGATCGCCGG GATCATCTTT
AGTATGCGCG GAATTACTCT GCAACTTCCC CGCTCTGCTT TTCTCGCCGC CCAGGCCATT
CTTGGCTGCA TGATTGCGCA AAACCTCACT GGTTCGATTC TCACCACCCT GGCCGTCAAC
TGGCCGATCG TGCTTGCAAT TTTACTGGTA ACGCTGCTTT CCAGCGCCAT TGTGGGTTGG
TTATTGGTGC GCTATAGCTC ATTGCCTGGA AATACCGGTG CCTGGGGCTC CTCTCCTGGC
GGCGCGGCGG CAATGGTCGC TATGGCGCAA GATTACGGCG CAGATATTCG CCTGGTGGCG
TTTATGCAAT ATCTGCGAGT GCTGTTCGTC GCGGGGGCCG CTGTTCTGGT CACCCGCATG
ATGCTGGGCG ATAACGCTGA AGCGGTTAAC CAGCATATCG TCTGGTTCCC GCCAGTGAGC
ATTAATCTCC TGCTTACTAT TTTGCTCGCG GTCGTTGCCG GTACAGTGGG ATGCCTGCTG
CGTCTTCCTT CCGGCACGAT GCTCATCCCG ATGCTGGCGG GCGCAGTGCT CCAGTCTGGT
CAGCTCATCA CCATCGAACT ACCGGAATGG CTGCTGGCGA TGGCGTATAT GGCAATTGGC
TGGCGGATTG GTCTTGGTTT CGATAAACAA ATCTTACTGC GGGCACTACG CCCGCTACCG
CAAATCCTGC TGTCGATTTT TGCTCTGCTG GCTATTTGTG CGGGTATGGC GTGGGGGCTG
ACCCGGTTTA TGCACATTGA TTTTATGACT GCCTACCTCG CCACCAGCCC CGGCGGGCTT
GATACCGTGG CGGTCATCGC CGCAGGGAGC AATGCCGATA TGGCGCTCAT TATGGCGATG
CAAACCCTAC GCCTGTTCAG TATTTTGCTG ACAGGGCCTG CCATTGCGCG GTTTATTTCA
ACCTATGCGC CGAAGCGGTC GGCCTAG
 
Protein sequence
MPVLQWGMLC VLSLLLSIGF LAVHLPAALL LGPMIAGIIF SMRGITLQLP RSAFLAAQAI 
LGCMIAQNLT GSILTTLAVN WPIVLAILLV TLLSSAIVGW LLVRYSSLPG NTGAWGSSPG
GAAAMVAMAQ DYGADIRLVA FMQYLRVLFV AGAAVLVTRM MLGDNAEAVN QHIVWFPPVS
INLLLTILLA VVAGTVGCLL RLPSGTMLIP MLAGAVLQSG QLITIELPEW LLAMAYMAIG
WRIGLGFDKQ ILLRALRPLP QILLSIFALL AICAGMAWGL TRFMHIDFMT AYLATSPGGL
DTVAVIAAGS NADMALIMAM QTLRLFSILL TGPAIARFIS TYAPKRSA