Gene EcDH1_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2919 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3131412 
End bp3132140 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content48% 
IMG OID 
ProductPili assembly chaperone, N-terminal 
Protein accessionACX40552 
Protein GI260450130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.264872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTTA TTAAAGGATT ACCCTTAATG TTGTTAACCA TCAGCTTGGG TTGCAATGCT 
GCGGTGCAAC CCGATCGCAC ACGCATTGTG TTTAACGCCA ATGACAAAGC CACCAGCCTG
CGTATCGAAA ACCAAAGTGA CAAACTGCCT TATCTTGCTT ATTCCTGGAT AGAAAATGAA
AAAGGGGAGA AAAGCGATGC TCTTCTGGTC GCTTTGCCCC CTATTCAACG TCTGGAACCG
AAAGCGACAT CGCAGGTGCG GGTTGTGAAA CAAGCCTCAA CCACACAATT ACCTGGCGAT
CGCGAAACGC TATTTTTCTA CAATATGCGC GAAATTCCTC CCGCTCCGGA TAAAAGCAGC
GACCATGCGA TACTTCAGGT CGCTATTCAA AGTCGTATTA AATTGTTCTG GCGACCGGCT
GCATTACGCA AGAAAGCAGG AGAAAAGGTC GAACTGCAGT TACAGGTCAG CCAGCAGGGC
AACCAACTGA CACTGAAAAA TCCTACCGCG TATTATCTGA CCATTGCCTA TCTGGGGAGA
AATGAAAAAG GCGTTCTCCC AGGCTTCAAA ACCGTGATGG TTGCACCTTT TAGTACGGTC
AACACAAACA CCGGAAGTTA TAGCGGCAGC CAGTTTTATC TCGGTTACAT GGATGATTAC
GGCGCATTAC GCATGACGAC GCTCAACTGC AGCGGACAAT GCCGTTTACA AGCAGTGGAG
GCGAAATGA
 
Protein sequence
MTFIKGLPLM LLTISLGCNA AVQPDRTRIV FNANDKATSL RIENQSDKLP YLAYSWIENE 
KGEKSDALLV ALPPIQRLEP KATSQVRVVK QASTTQLPGD RETLFFYNMR EIPPAPDKSS
DHAILQVAIQ SRIKLFWRPA ALRKKAGEKV ELQLQVSQQG NQLTLKNPTA YYLTIAYLGR
NEKGVLPGFK TVMVAPFSTV NTNTGSYSGS QFYLGYMDDY GALRMTTLNC SGQCRLQAVE
AK