Gene EcDH1_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2916 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3126651 
End bp3127934 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content51% 
IMG OID 
Productcitrate synthase I 
Protein accessionACX40549 
Protein GI260450127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.349648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATA CAAAAGCAAA ACTCACCCTC AACGGGGATA CAGCTGTTGA ACTGGATGTG 
CTGAAAGGCA CGCTGGGTCA AGATGTTATT GATATCCGTA CTCTCGGTTC AAAAGGTGTG
TTCACCTTTG ACCCAGGCTT CACTTCAACC GCATCCTGCG AATCTAAAAT TACTTTTATT
GATGGTGATG AAGGTATTTT GCTGCACCGC GGTTTCCCGA TCGATCAGCT GGCGACCGAT
TCTAACTACC TGGAAGTTTG TTACATCCTG CTGAATGGTG AAAAACCGAC TCAGGAACAG
TATGACGAAT TTAAAACTAC GGTGACCCGT CATACCATGA TCCACGAGCA GATTACCCGT
CTGTTCCATG CTTTCCGTCG CGACTCGCAT CCAATGGCAG TCATGTGTGG TATTACCGGC
GCGCTGGCGG CGTTCTATCA CGACTCGCTG GATGTTAACA ATCCTCGTCA CCGTGAAATT
GCCGCGTTCC GCCTGCTGTC GAAAATGCCG ACCATGGCCG CGATGTGTTA CAAGTATTCC
ATTGGTCAGC CATTTGTTTA CCCGCGCAAC GATCTCTCCT ACGCCGGTAA CTTCCTGAAT
ATGATGTTCT CCACGCCGTG CGAACCGTAT GAAGTTAATC CGATTCTGGA ACGTGCTATG
GACCGTATTC TGATCCTGCA CGCTGACCAT GAACAGAACG CCTCTACCTC CACCGTGCGT
ACCGCTGGCT CTTCGGGTGC GAACCCGTTT GCCTGTATCG CAGCAGGTAT TGCTTCACTG
TGGGGACCTG CGCACGGCGG TGCTAACGAA GCGGCGCTGA AAATGCTGGA AGAAATCAGC
TCCGTTAAAC ACATTCCGGA ATTTGTTCGT CGTGCGAAAG ACAAAAATGA TTCTTTCCGC
CTGATGGGCT TCGGTCACCG CGTGTACAAA AATTACGACC CGCGCGCCAC CGTAATGCGT
GAAACCTGCC ATGAAGTGCT GAAAGAGCTG GGCACGAAGG ATGACCTGCT GGAAGTGGCT
ATGGAGCTGG AAAACATCGC GCTGAACGAC CCGTACTTTA TCGAGAAGAA ACTGTACCCG
AACGTCGATT TCTACTCTGG TATCATCCTG AAAGCGATGG GTATTCCGTC TTCCATGTTC
ACCGTCATTT TCGCAATGGC ACGTACCGTT GGCTGGATCG CCCACTGGAG CGAAATGCAC
AGTGACGGTA TGAAGATTGC CCGTCCGCGT CAGCTGTATA CAGGATATGA AAAACGCGAC
TTTAAAAGCG ATATCAAGCG TTAA
 
Protein sequence
MADTKAKLTL NGDTAVELDV LKGTLGQDVI DIRTLGSKGV FTFDPGFTST ASCESKITFI 
DGDEGILLHR GFPIDQLATD SNYLEVCYIL LNGEKPTQEQ YDEFKTTVTR HTMIHEQITR
LFHAFRRDSH PMAVMCGITG ALAAFYHDSL DVNNPRHREI AAFRLLSKMP TMAAMCYKYS
IGQPFVYPRN DLSYAGNFLN MMFSTPCEPY EVNPILERAM DRILILHADH EQNASTSTVR
TAGSSGANPF ACIAAGIASL WGPAHGGANE AALKMLEEIS SVKHIPEFVR RAKDKNDSFR
LMGFGHRVYK NYDPRATVMR ETCHEVLKEL GTKDDLLEVA MELENIALND PYFIEKKLYP
NVDFYSGIIL KAMGIPSSMF TVIFAMARTV GWIAHWSEMH SDGMKIARPR QLYTGYEKRD
FKSDIKR