Gene EcDH1_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2908 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3116939 
End bp3118105 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content54% 
IMG OID 
Productsuccinyl-CoA synthetase, beta subunit 
Protein accessionACX40541 
Protein GI260450119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.816309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAC ATGAATATCA GGCAAAACAA CTTTTTGCCC GCTATGGCTT ACCAGCACCG 
GTGGGTTATG CCTGTACTAC TCCGCGCGAA GCAGAAGAAG CCGCTTCAAA AATCGGTGCC
GGTCCGTGGG TAGTGAAATG TCAGGTTCAC GCTGGTGGCC GCGGTAAAGC GGGCGGTGTG
AAAGTTGTAA ACAGCAAAGA AGACATCCGT GCTTTTGCAG AAAACTGGCT GGGCAAGCGT
CTGGTAACGT ATCAAACAGA TGCCAATGGC CAACCGGTTA ACCAGATTCT GGTTGAAGCA
GCGACCGATA TCGCTAAAGA GCTGTATCTC GGTGCCGTTG TTGACCGTAG TTCCCGTCGT
GTGGTCTTTA TGGCCTCCAC CGAAGGCGGC GTGGAAATCG AAAAAGTGGC GGAAGAAACT
CCGCACCTGA TCCATAAAGT TGCGCTTGAT CCGCTGACTG GCCCGATGCC GTATCAGGGA
CGCGAGCTGG CGTTCAAACT GGGTCTGGAA GGTAAACTGG TTCAGCAGTT CACCAAAATC
TTCATGGGCC TGGCGACCAT TTTCCTGGAG CGCGACCTGG CGTTGATCGA AATCAACCCG
CTGGTCATCA CCAAACAGGG CGATCTGATT TGCCTCGACG GCAAACTGGG CGCTGACGGC
AACGCACTGT TCCGCCAGCC TGATCTGCGC GAAATGCGTG ACCAGTCGCA GGAAGATCCG
CGTGAAGCAC AGGCTGCACA GTGGGAACTG AACTACGTTG CGCTGGACGG TAACATCGGT
TGTATGGTTA ACGGCGCAGG TCTGGCGATG GGTACGATGG ACATCGTTAA ACTGCACGGC
GGCGAACCGG CTAACTTCCT TGACGTTGGC GGCGGCGCAA CCAAAGAACG TGTAACCGAA
GCGTTCAAAA TCATCCTCTC TGACGACAAA GTGAAAGCCG TTCTGGTTAA CATCTTCGGC
GGTATCGTTC GTTGCGACCT GATCGCTGAC GGTATCATCG GCGCGGTAGC AGAAGTGGGT
GTTAACGTAC CGGTCGTGGT ACGTCTGGAA GGTAACAACG CCGAACTCGG CGCGAAGAAA
CTGGCTGACA GCGGCCTGAA TATTATTGCA GCAAAAGGTC TGACGGATGC AGCTCAGCAG
GTTGTTGCCG CAGTGGAGGG GAAATAA
 
Protein sequence
MNLHEYQAKQ LFARYGLPAP VGYACTTPRE AEEAASKIGA GPWVVKCQVH AGGRGKAGGV 
KVVNSKEDIR AFAENWLGKR LVTYQTDANG QPVNQILVEA ATDIAKELYL GAVVDRSSRR
VVFMASTEGG VEIEKVAEET PHLIHKVALD PLTGPMPYQG RELAFKLGLE GKLVQQFTKI
FMGLATIFLE RDLALIEINP LVITKQGDLI CLDGKLGADG NALFRQPDLR EMRDQSQEDP
REAQAAQWEL NYVALDGNIG CMVNGAGLAM GTMDIVKLHG GEPANFLDVG GGATKERVTE
AFKIILSDDK VKAVLVNIFG GIVRCDLIAD GIIGAVAEVG VNVPVVVRLE GNNAELGAKK
LADSGLNIIA AKGLTDAAQQ VVAAVEGK