| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2876 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3082688 |
|---|
| End bp | 3083506 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | ACX40509 |
|---|
| Protein GI | 260450087 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000000104065 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC GCGTGATTGC TCTCGACTTA GACGGCACCT TATTGACCCC GAAAAAGACC
CTGCTTCCTT CATCGATAGA AGCCCTGGCC CGCGCTCGCG AAGCAGGCTA TCAATTAATC
ATCGTCACAG GTCGCCATCA CGTCGCTATT CATCCTTTTT ATCAGGCGCT GGCGCTGGAT
ACACCTGCTA TTTGCTGTAA TGGCACCTAT TTGTATGATT ATCATGCAAA AACCGTGCTG
GAAGCGGACC CAATGCCCGT TATTAAAGCC CTGCAACTCA TTGAGATGCT GAATGAACAC
CACATTCACG GTCTGATGTA TGTCGATGAT GCAATGGTCT ATGAGCACCC GACCGGGCAT
GTCATTCGCA CATCTAACTG GGCGCAAACC CTGCCGCCGG AACAGCGTCC GACTTTCACA
CAAGTCGCTT CTCTGGCTGA AACGGCGCAA CAAGTTAACG CCGTATGGAA GTTCGCCCTG
ACGCACGATG ACCTGCCGCA ATTGCAGCAT TTTGGTAAGC ATGTCGAACA TGAACTGGGA
CTGGAGTGTG AATGGTCCTG GCACGATCAG GTTGATATTG CACGCGGCGG CAACAGCAAA
GGTAAACGTT TGACGAAATG GGTTGAGGCG CAAGGTTGGT CGATGGAAAA CGTCGTGGCA
TTCGGCGATA ACTTTAATGA TATCAGTATG CTGGAAGCCG CTGGTACAGG CGTGGCGATG
GGCAACGCCG ATGACGCGGT AAAAGCGCGC GCCAACATTG TGATTGGTGA TAACACCACC
GACAGCATTG CCCAGTTCAT TTATAGCCAC CTGATTTAA
|
|---|
| Protein sequence | MTTRVIALDL DGTLLTPKKT LLPSSIEALA RAREAGYQLI IVTGRHHVAI HPFYQALALD
TPAICCNGTY LYDYHAKTVL EADPMPVIKA LQLIEMLNEH HIHGLMYVDD AMVYEHPTGH
VIRTSNWAQT LPPEQRPTFT QVASLAETAQ QVNAVWKFAL THDDLPQLQH FGKHVEHELG
LECEWSWHDQ VDIARGGNSK GKRLTKWVEA QGWSMENVVA FGDNFNDISM LEAAGTGVAM
GNADDAVKAR ANIVIGDNTT DSIAQFIYSH LI
|
|---|
| |