Gene EcDH1_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2871 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3075355 
End bp3077616 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content51% 
IMG OID 
Productaconitate hydratase domain protein 
Protein accessionACX40504 
Protein GI260450082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGT TATCTGAAAA AGGCGTGTTT CTCGCCAGTA ATAACGAAAT AATTGCCGAA 
GAACATTTCA CCGGCGAAAT TAAAAAAGAA GAAGCCAAAA AAGGCACTAT TGCCTGGTCT
ATTCTCTCTT CGCATAATAC GTCCGGAAAT ATGGATAAAC TTAAAATTAA GTTTGATTCA
TTAGCCTCTC ACGATATTAC CTTTGTTGGT ATTGTACAGA CCGCTAAAGC GTCCGGTATG
GAACGTTTCC CGCTGCCGTA TGTGCTGACC AACTGCCATA ACTCACTCTG CGCCGTCGGC
GGCACTATTA ACGGTGATGA CCATGTTTTT GGTTTATCGG CGGCCCAGCG TTATGGCGGT
ATTTTTGTGC CTCCGCATAT TGCGGTCATC CATCAATATA TGCGTGAGAT GATGGCAGGC
GGCGGCAAAA TGATCCTCGG GTCAGACAGC CACACCCGTT ACGGTGCATT AGGGACAATG
GCAGTCGGTG AGGGCGGCGG TGAGTTGGTA AAACAGCTGC TTAATGACAC CTGGGATATC
GACTATCCGG GCGTGGTTGC GGTGCATCTG ACCGGAAAAC CTGCGCCGTA TGTGGGGCCA
CAGGATGTGG CGCTGGCTAT CATTGGCGCG GTGTTCAAAA ACGGTTACGT CAAAAACAAA
GTCATGGAGT TCGTTGGACC GGGCGTTAGC GCGCTCTCTA CCGATTTCCG TAACAGCGTT
GACGTGATGA CCACTGAAAC GACCTGTTTA AGTTCTGTCT GGCAAACCGA TGAAGAAGTC
CATAACTGGC TGGCGCTGCA CGGTCGCGGC CAGGATTACT GCCAGCTTAA CCCTCAACCG
ATGGCGTACT ACGATGGCTG CATCAGCGTT GATTTAAGCG CCATCAAACC AATGATTGCG
CTGCCGTTCC ACCCGAGCAA CGTGTATGAA ATCGACACAC TGAACCAGAA CCTGACCGAC
ATTCTGCGTG AGATTGAAAT TGAGTCCGAA CGCGTGGCGC ACGGTAAAGC CAAACTCTCG
CTGCTGGATA AAGTGGAAAA TGGTCGCCTG AAAGTGCAGC AGGGGATTAT CGCGGGCTGT
TCTGGCGGTA ACTACGAAAA CGTCATCGCG GCGGCGAATG CACTGCGCGG TCAATCCTGT
GGCAATGACA CCTTCTCGCT GGCAGTTTAC CCGTCATCAC AGCCGGTGTT TATGGATCTC
GCCAAAAAAG GTGTGGTAGC AGATTTGATT GGCGCAGGCG CAATCATCAG AACCGCGTTC
TGCGGCCCAT GCTTTGGCGC GGGCGATACG CCAATCAACA ACGGTTTGAG TATTCGCCAC
ACCACGCGTA ACTTCCCGAA CCGCGAAGGC TCTAAGCCAG CTAATGGGCA GATGTCAGCG
GTGGCGTTGA TGGACGCTCG TTCTATCGCT GCGACTGCGG CAAACGGTGG CTATTTAACC
TCTGCCAGCG AACTTGATTG CTGGGACAAC GTGCCGGAGT ACGCCTTCGA TGTAACGCCG
TATAAAAACC GTGTTTATCA GGGCTTTGTG AAAGGGGCAA CTCAGCAACC GCTGATTTAC
GGGCCGAACA TTAAAGACTG GCCGGAATTG GGTGCGCTGA CTGACAATAT CGTCCTGAAA
GTGTGCTCGA AGATCCTCGA CGAAGTGACC ACCACCGACG AACTGATTCC TTCCGGTGAA
ACCTCTTCTT ATCGTTCAAA TCCGATTGGT CTGGCGGAGT TTACCCTGTC TCGCCGCGAT
CCCGGTTATG TTAGCAGAAG TAAAGCGACT GCTGAGCTGG AAAATCAGCG TCTGGCGGGG
AATGTCAGCG AGCTGACAGA GGTGTTTGCG CGCATTAAGC AGATTGCTGG TCAGGAGCAT
ATTGATCCGC TGCAAACTGA AATTGGCAGC ATGGTCTATG CGGTGAAACC AGGCGATGGT
TCTGCGCGTG AACAGGCGGC GAGCTGCCAG CGTGTGATTG GCGGTCTGGC GAATATTGCC
GAGGAGTACG CGACTAAACG CTATCGTTCT AACGTCATCA ACTGGGGGAT GTTACCGCTG
CAAATGGCGG AAGTACCAAC CTTTGAAGTG GGGGATTACA TTTACATCCC TGGCATTAAA
GCGGCGCTGG ATAATCCGGG TACGACGTTT AAAGGTTATG TGATCCATGA AGATGCGCCG
GTAACGGAAA TTACGCTCTA TATGGAAAGT CTGACTGCTG AAGAGCGCGA GATTATCAAG
GCGGGTAGTT TGATTAACTT CAATAAAAAC CGTCAGATGT AA
 
Protein sequence
MIKLSEKGVF LASNNEIIAE EHFTGEIKKE EAKKGTIAWS ILSSHNTSGN MDKLKIKFDS 
LASHDITFVG IVQTAKASGM ERFPLPYVLT NCHNSLCAVG GTINGDDHVF GLSAAQRYGG
IFVPPHIAVI HQYMREMMAG GGKMILGSDS HTRYGALGTM AVGEGGGELV KQLLNDTWDI
DYPGVVAVHL TGKPAPYVGP QDVALAIIGA VFKNGYVKNK VMEFVGPGVS ALSTDFRNSV
DVMTTETTCL SSVWQTDEEV HNWLALHGRG QDYCQLNPQP MAYYDGCISV DLSAIKPMIA
LPFHPSNVYE IDTLNQNLTD ILREIEIESE RVAHGKAKLS LLDKVENGRL KVQQGIIAGC
SGGNYENVIA AANALRGQSC GNDTFSLAVY PSSQPVFMDL AKKGVVADLI GAGAIIRTAF
CGPCFGAGDT PINNGLSIRH TTRNFPNREG SKPANGQMSA VALMDARSIA ATAANGGYLT
SASELDCWDN VPEYAFDVTP YKNRVYQGFV KGATQQPLIY GPNIKDWPEL GALTDNIVLK
VCSKILDEVT TTDELIPSGE TSSYRSNPIG LAEFTLSRRD PGYVSRSKAT AELENQRLAG
NVSELTEVFA RIKQIAGQEH IDPLQTEIGS MVYAVKPGDG SAREQAASCQ RVIGGLANIA
EEYATKRYRS NVINWGMLPL QMAEVPTFEV GDYIYIPGIK AALDNPGTTF KGYVIHEDAP
VTEITLYMES LTAEEREIIK AGSLINFNKN RQM