Gene EcDH1_2775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2775 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2975376 
End bp2976206 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content56% 
IMG OID 
ProductN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 
Protein accessionACX40408 
Protein GI260449986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0138592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAGAT TCTTCTGGCT GGTCGCTGCC GCTCTGTTAT TGGCAGGGTG TGCAGGCGAA 
AAAGGCATTG TCGAGAAAGA GGGATATCAG CTTGATACCC GACGCCAGGC GCAGGCGGCG
TATCCGCGCA TTAAAGTGCT GGTGATCCAC TACACCGCAG ATGATTTTGA TAGCTCGCTG
GCGACACTGA CCGATAAGCA GGTCAGCTCG CATTATCTGG TCCCTGCGGT ACCACCGCGA
TACAACGGTA AACCGCGCAT CTGGCAACTG GTGCCGGAAC AAGAACTGGC CTGGCATGCG
GGGATTAGCG CCTGGCGCGG GGCAACGCGC CTTAACGACA CCTCTATTGG CATTGAGCTG
GAAAACCGTG GCTGGCAAAA ATCGGCCGGA GTGAAATATT TTGCCCCGTT TGAACCGGCA
CAGATTCAGG CGCTTATTCC ACTGGCGAAA GATATTATTG CCCGTTATCA CATCAAGCCG
GAAAACGTAG TGGCACATGC GGATATCGCA CCGCAGCGCA AAGACGATCC GGGGCCATTA
TTTCCCTGGC AGCAACTGGC GCAGCAGGGG ATTGGTGCCT GGCCGGATGC GCAGCGGGTT
AACTTTTACC TTGCCGGGCG CGCGCCGCAC ACACCGGTAG ATACCGCGTC ATTGCTGGAG
CTTTTGGCGC GCTACGGTTA TGACGTTAAA CCTGATATGA CACCGCGCGA GCAGCGGCGC
GTGATTATGG CATTCCAGAT GCATTTCCGC CCGACGTTAT ATAACGGCGA AGCGGATGCA
GAAACTCAGG CGATTGCCGA AGCATTGCTG GAGAAATACG GGCAGGATTA G
 
Protein sequence
MRRFFWLVAA ALLLAGCAGE KGIVEKEGYQ LDTRRQAQAA YPRIKVLVIH YTADDFDSSL 
ATLTDKQVSS HYLVPAVPPR YNGKPRIWQL VPEQELAWHA GISAWRGATR LNDTSIGIEL
ENRGWQKSAG VKYFAPFEPA QIQALIPLAK DIIARYHIKP ENVVAHADIA PQRKDDPGPL
FPWQQLAQQG IGAWPDAQRV NFYLAGRAPH TPVDTASLLE LLARYGYDVK PDMTPREQRR
VIMAFQMHFR PTLYNGEADA ETQAIAEALL EKYGQD