| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2752 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2943136 |
|---|
| End bp | 2943747 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | outer membrane lipoprotein carrier protein LolA |
|---|
| Protein accession | ACX40385 |
|---|
| Protein GI | 260449963 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000100398 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TTGCCATCAC CTGTGCATTA CTCTCAAGCT TAGTAGCAAG CAGCGTTTGG
GCTGATGCCG CAAGCGATCT GAAAAGCCGC CTGGATAAAG TCAGCAGCTT CCACGCCAGC
TTCACACAAA AAGTGACTGA CGGTAGCGGC GCGGCGGTGC AGGAAGGTCA GGGCGATCTG
TGGGTGAAAC GTCCAAACTT ATTCAACTGG CATATGACAC AACCTGATGA AAGCATTCTG
GTTTCTGACG GTAAAACACT GTGGTTCTAT AACCCGTTCG TTGAGCAAGC TACGGCAACC
TGGCTGAAAG ATGCCACCGG TAATACGCCG TTTATGCTGA TTGCCCGCAA CCAGTCCAGC
GACTGGCAGC AGTACAATAT CAAACAGAAT GGCGATGACT TTGTCCTGAC GCCGAAAGCC
AGCAATGGCA ATCTGAAGCA GTTCACCATT AACGTGGGAC GTGATGGCAC AATCCATCAG
TTTAGCGCGG TGGAGCAGGA CGATCAGCGC AGCAGTTATC AACTGAAATC CCAGCAAAAT
GGGGCTGTGG ATGCAGCGAA ATTTACCTTC ACCCCGCCGC AAGGCGTCAC GGTAGATGAT
CAACGTAAGT AG
|
|---|
| Protein sequence | MKKIAITCAL LSSLVASSVW ADAASDLKSR LDKVSSFHAS FTQKVTDGSG AAVQEGQGDL
WVKRPNLFNW HMTQPDESIL VSDGKTLWFY NPFVEQATAT WLKDATGNTP FMLIARNQSS
DWQQYNIKQN GDDFVLTPKA SNGNLKQFTI NVGRDGTIHQ FSAVEQDDQR SSYQLKSQQN
GAVDAAKFTF TPPQGVTVDD QRK
|
|---|
| |