| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2734 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2920091 |
|---|
| End bp | 2920855 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | ACX40367 |
|---|
| Protein GI | 260449945 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000015723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA CTAAATTACT GCTGGCGATT GCGACCTCTG CAGCATTACT GACAGGGTGT
CAAAATACCC ACGGTATTGA TACCAATATG GCTATCAGCT CCGGTTTAAA TGCCTATAAA
GCAGCAACAT TAAGCGATGC CGATGCAAAA GCGATTGCCA ATCAGGGCTG TGCCGAAATG
GACAGCGGCA ATCAAGTCGC AAGTAAATCC AGCAAGTACG GTAAACGTCT GGCAAAAATC
GCCAAAGCAT TGGGTAACAA TATTAATGGC ACGCCGGTCA ACTATAAGGT TTATATGACC
AGCGACGTCA ACGCATGGGC GATGGCGAAC GGCTGTGTTC GTGTCTACAG TGGCCTGATG
GACATGATGA ATGACAACGA AATTGAAGGC GTTCTGGGCC ATGAACTGGG CCACGTCGCG
TTGGGTCACT CGCTGGCTGA AATGAAAGCT TCTTATGCGA TCGTTGCCGC ACGCGATGCC
ATTTCAGCTA CCAGCGGTGT GGCTTCCCAG CTTTCCCGCT CACAATTAGG TGATATCGCA
GAAGGCGCTA TCAATGCTAA ATACTCCCGT GATAAAGAGT CCGAAGCAGA TGATTTCTCC
TTTGATCTGT TGAAGAAACG TGGCATCAGC ACCCAGGGGC TGGTTGGCAG CTTTGAAACA
CTGGCTAGCC TGGATGGCGG TCGCACCCAG TCCATGTTTG ACTCTCACCC ACCATCAACA
GAGCGTGCGC AACACATCCG TGATCGTATC GCCTCTGGTA AGTAA
|
|---|
| Protein sequence | MKNTKLLLAI ATSAALLTGC QNTHGIDTNM AISSGLNAYK AATLSDADAK AIANQGCAEM
DSGNQVASKS SKYGKRLAKI AKALGNNING TPVNYKVYMT SDVNAWAMAN GCVRVYSGLM
DMMNDNEIEG VLGHELGHVA LGHSLAEMKA SYAIVAARDA ISATSGVASQ LSRSQLGDIA
EGAINAKYSR DKESEADDFS FDLLKKRGIS TQGLVGSFET LASLDGGRTQ SMFDSHPPST
ERAQHIRDRI ASGK
|
|---|
| |