Gene EcDH1_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2701 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2877688 
End bp2878230 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content47% 
IMG OID 
ProductFimbrial protein 
Protein accessionACX40334 
Protein GI260449912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000889642 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA AAACGATATT TCAGTGCGTT ATCTTGTTCT TTAGCATTCT TAACATCCAT 
GTCGGGATGG CTGGGCCTGA ACAAGTTAGT ATGCATATTT ATGGGAATGT GGTCGATCAG
GGCTGTGATG TCGCCACCAA AAGTGCATTA CAAAATATTC ATATTGGTGA TTTTAATATC
AGTGATTTTC AGGCCGCGAA TACCGTAAGC ACTGCTGCTG ATTTGAATAT CGATATCACC
GGTTGTGCCG CTGGTATTAC TGGCGCGGAC GTCCTTTTTA GCGGCGAGGC TGACACCCTT
GCGCCGACAC TGCTCAAACT AACTGACACA GGCGGAAGCG GTGGTATGGC AACGGGGATT
GCCGTGCAAA TTCTTGATGC GCAAAGTCAG CAAGAAATCC CGCTCAATCA GGTCCAGCCT
CTTACGCCCT TAAAAGCCGG GGATAACACA CTCAAATATC AACTTCGTTA TAAGTCCACA
AAGGCGGGAG CAACGGGCGG TAATGCGACG GCGGTTCTCT ATTTTGATCT GGTTTACCAG
TGA
 
Protein sequence
MKKKTIFQCV ILFFSILNIH VGMAGPEQVS MHIYGNVVDQ GCDVATKSAL QNIHIGDFNI 
SDFQAANTVS TAADLNIDIT GCAAGITGAD VLFSGEADTL APTLLKLTDT GGSGGMATGI
AVQILDAQSQ QEIPLNQVQP LTPLKAGDNT LKYQLRYKST KAGATGGNAT AVLYFDLVYQ