Gene EcDH1_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2628 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2802237 
End bp2806199 
Gene Length3963 bp 
Protein Length1320 aa 
Translation table11 
GC content57% 
IMG OID 
Productdelta-1-pyrroline-5-carboxylate dehydrogenase 
Protein accessionACX40262 
Protein GI260449840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACCA CCACCATGGG GGTTAAGCTG GACGACGCGA CGCGTGAGCG TATTAAGTCT 
GCCGCGACAC GTATCGATCG CACACCACAC TGGTTAATTA AGCAGGCGAT TTTTTCTTAT
CTCGAACAAC TGGAAAACAG CGATACTCTG CCGGAGCTAC CTGCGCTGCT TTCTGGCGCG
GCCAATGAGA GCGATGAAGC ACCGACTCCG GCAGAGGAAC CACACCAGCC ATTCCTCGAC
TTTGCCGAGC AAATATTGCC CCAGTCGGTT TCCCGCGCCG CGATCACCGC GGCCTATCGC
CGCCCGGAAA CCGAAGCGGT TTCTATGCTG CTGGAACAAG CCCGCCTGCC GCAGCCAGTT
GCTGAACAGG CGCACAAACT GGCGTATCAG CTGGCCGATA AACTGCGTAA TCAAAAAAAT
GCCAGTGGTC GCGCAGGTAT GGTCCAGGGG TTATTGCAGG AGTTTTCGCT GTCATCGCAG
GAAGGCGTGG CGCTGATGTG TCTGGCGGAA GCGTTGTTGC GTATTCCCGA CAAAGCCACC
CGCGACGCGT TAATTCGCGA CAAAATCAGC AACGGTAACT GGCAGTCACA CATTGGTCGT
AGCCCGTCAC TGTTTGTTAA TGCCGCCACC TGGGGGCTGC TGTTTACTGG CAAACTGGTT
TCCACCCATA ACGAAGCCAG CCTCTCCCGC TCGCTGAACC GCATTATCGG TAAAAGCGGT
GAACCGCTGA TCCGCAAAGG TGTGGATATG GCGATGCGCC TGATGGGTGA GCAGTTCGTC
ACTGGCGAAA CCATCGCGGA AGCGTTAGCC AATGCCCGCA AGCTGGAAGA GAAAGGTTTC
CGTTACTCTT ACGATATGCT GGGCGAAGCC GCGCTGACCG CCGCAGATGC ACAGGCGTAT
ATGGTTTCCT ATCAGCAGGC GATTCACGCC ATCGGTAAAG CGTCTAACGG TCGTGGCATC
TATGAAGGGC CGGGCATTTC AATCAAACTG TCGGCGCTGC ATCCGCGTTA TAGCCGCGCC
CAGTATGACC GGGTAATGGA AGAGCTTTAC CCGCGTCTGA AATCACTCAC CCTGCTGGCG
CGTCAGTACG ATATTGGTAT CAACATTGAC GCCGAAGAGT CCGATCGCCT GGAGATCTCC
CTCGATCTGC TGGAAAAACT CTGTTTCGAG CCGGAACTGG CAGGCTGGAA CGGCATCGGT
TTTGTTATTC AGGCTTATCA AAAACGCTGC CCGTTGGTGA TCGATTACCT GATTGATCTC
GCCACCCGCA GCCGTCGCCG TCTGATGATT CGCCTGGTGA AAGGCGCGTA CTGGGATAGT
GAAATTAAGC GTGCGCAGAT GGACGGCCTT GAAGGTTATC CGGTTTATAC CCGCAAGGTG
TATACCGACG TTTCTTATCT CGCCTGTGCG AAAAAGCTGC TGGCGGTGCC GAATCTAATC
TACCCGCAGT TCGCGACGCA CAACGCCCAT ACGCTGGCGG CGATTTATCA ACTGGCGGGG
CAGAACTACT ACCCGGGTCA GTACGAGTTC CAGTGCCTGC ATGGTATGGG CGAGCCACTG
TATGAGCAGG TCACCGGGAA AGTTGCCGAC GGCAAACTTA ACCGTCCGTG TCGTATTTAT
GCTCCGGTTG GCACACATGA AACGCTGTTG GCGTATCTGG TGCGTCGCCT GCTGGAAAAC
GGTGCTAACA CCTCGTTTGT TAACCGTATT GCCGACACCT CTTTGCCACT GGATGAACTG
GTCGCCGATC CGGTCACTGC TGTAGAAAAA CTGGCGCAAC AGGAAGGGCA AACTGGATTA
CCGCATCCGA AAATTCCCCT GCCGCGCGAT CTTTACGGTC ACGGGCGCGA CAACTCGGCA
GGGCTGGATC TCGCTAACGA ACACCGCCTG GCCTCGCTCT CCTCTGCCCT GCTCAATAGT
GCACTGCAAA AATGGCAGGC CTTGCCAATG CTGGAACAAC CGGTAGCGGC AGGTGAGATG
TCGCCCGTTA TTAACCCTGC GGAACCGAAA GATATTGTGG GCTATGTGCG TGAAGCCACG
CCGCGTGAAG TAGAACAGGC GCTGGAAAGT GCGGTTAATA ACGCGCCAAT CTGGTTTGCC
ACGCCTCCGG CTGAACGCGC AGCGATTTTG CACCGCGCTG CCGTGCTGAT GGAAAGCCAG
ATGCAGCAAC TGATTGGTAT TCTGGTGCGT GAGGCCGGAA AAACCTTCAG TAACGCCATT
GCCGAAGTGC GCGAAGCGGT CGATTTTCTC CACTACTACG CCGGACAGGT GCGGGATGAT
TTCGCTAACG AAACCCACCG TCCATTAGGG CCTGTGGTGT GTATCAGTCC GTGGAACTTC
CCGCTGGCTA TTTTCACCGG GCAGATCGCC GCCGCACTGG CGGCAGGTAA CAGCGTGCTG
GCAAAACCGG CAGAACAAAC GCCGCTGATT GCCGCGCAAG GGATCGCCAT TTTGCTGGAA
GCGGGTGTAC CGCCAGGCGT GGTGCAATTG CTGCCAGGTC GGGGTGAAAC CGTGGGCGCG
CAACTGACGG GTGATGATCG CGTGCGCGGG GTGATGTTTA CCGGTTCAAC CGAAGTCGCT
ACGTTACTGC AGCGCAATAT CGCCAGCCGC CTGGACGCTC AGGGTCGCCC TATTCCGCTC
ATCGCTGAAA CCGGCGGCAT GAACGCGATG ATTGTCGATT CTTCAGCACT GACCGAACAG
GTCGTCGTGG ATGTACTGGC CTCGGCGTTC GACAGTGCGG GTCAGCGTTG TTCGGCGCTG
CGCGTGCTGT GCCTGCAAGA TGAGATTGCC GACCACACGT TGAAAATGCT GCGCGGCGCA
ATGGCCGAAT GCCGGATGGG TAATCCGGGT CGCCTGACCA CCGATATCGG TCCAGTGATT
GATAGCGAAG CGAAAGCCAA TATTGAGCGC CATATTCAGA CCATGCGTAG CAAAGGCCGT
CCGGTGTTCC AGGCGGTGCG GGAAAACAGC GAAGATGCCC GTGAATGGCA AAGCGGCACC
TTTGTCGCCC CGACGCTGAT CGAACTGGAT GACTTTGCCG AATTGCAAAA AGAGGTCTTT
GGTCCGGTGC TGCATGTGGT GCGTTACAAC CGTAACCAGC TACCAGAGCT GATCGAGCAG
ATTAACGCTT CCGGTTATGG TCTGACGCTT GGCGTCCATA CGCGCATTGA TGAAACCATC
GCCCAGGTCA CTGGCTCGGC CCATGTTGGT AACCTGTATG TTAACCGTAA TATGGTGGGC
GCAGTGGTTG GTGTGCAGCC GTTCGGCGGC GAAGGGTTGT CCGGTACCGG GCCGAAAGCA
GGCGGTCCGC TCTATCTCTA CCGTCTGCTG GCGAATCGCC CGGAAAGTGC GCTGGCAGTG
ACGCTCGCGC GTCAGGATGC AAAGTATCCG GTCGATGCGC AGTTGAAAGC CGCATTGACT
CAGCCGCTAA ATGCACTGCG GGAATGGGCA GCAAATCGTC CAGAATTGCA GGCGTTATGT
ACGCAATATG GCGAGCTGGC GCAGGCAGGA ACACAACGAT TGCTGCCGGG GCCGACGGGT
GAACGCAACA CCTGGACGCT GCTGCCGCGT GAGCGCGTGT TGTGTATTGC CGATGATGAG
CAGGATGCGC TGACTCAGCT CGCCGCCGTG CTGGCGGTGG GCAGCCAGGT ACTGTGGCCG
GATGACGCGC TGCATCGTCA GTTAGTGAAG GCATTGCCAT CGGCAGTCAG CGAACGTATT
CAACTGGCGA AAGCGGAAAA TATAACCGCT CAACCGTTTG ATGCGGTGAT CTTCCACGGT
GATTCGGATC AGCTTCGCGC ATTGTGTGAA GCAGTTGCCG CGCGGGATGG CACAATTGTT
TCGGTGCAGG GTTTTGCCCG TGGCGAAAGC AATATCCTTC TGGAACGGCT GTATATCGAG
CGTTCGCTGA GTGTGAATAC CGCTGCCGCT GGCGGTAACG CCAGCTTAAT GACTATAGGT
TAA
 
Protein sequence
MGTTTMGVKL DDATRERIKS AATRIDRTPH WLIKQAIFSY LEQLENSDTL PELPALLSGA 
ANESDEAPTP AEEPHQPFLD FAEQILPQSV SRAAITAAYR RPETEAVSML LEQARLPQPV
AEQAHKLAYQ LADKLRNQKN ASGRAGMVQG LLQEFSLSSQ EGVALMCLAE ALLRIPDKAT
RDALIRDKIS NGNWQSHIGR SPSLFVNAAT WGLLFTGKLV STHNEASLSR SLNRIIGKSG
EPLIRKGVDM AMRLMGEQFV TGETIAEALA NARKLEEKGF RYSYDMLGEA ALTAADAQAY
MVSYQQAIHA IGKASNGRGI YEGPGISIKL SALHPRYSRA QYDRVMEELY PRLKSLTLLA
RQYDIGINID AEESDRLEIS LDLLEKLCFE PELAGWNGIG FVIQAYQKRC PLVIDYLIDL
ATRSRRRLMI RLVKGAYWDS EIKRAQMDGL EGYPVYTRKV YTDVSYLACA KKLLAVPNLI
YPQFATHNAH TLAAIYQLAG QNYYPGQYEF QCLHGMGEPL YEQVTGKVAD GKLNRPCRIY
APVGTHETLL AYLVRRLLEN GANTSFVNRI ADTSLPLDEL VADPVTAVEK LAQQEGQTGL
PHPKIPLPRD LYGHGRDNSA GLDLANEHRL ASLSSALLNS ALQKWQALPM LEQPVAAGEM
SPVINPAEPK DIVGYVREAT PREVEQALES AVNNAPIWFA TPPAERAAIL HRAAVLMESQ
MQQLIGILVR EAGKTFSNAI AEVREAVDFL HYYAGQVRDD FANETHRPLG PVVCISPWNF
PLAIFTGQIA AALAAGNSVL AKPAEQTPLI AAQGIAILLE AGVPPGVVQL LPGRGETVGA
QLTGDDRVRG VMFTGSTEVA TLLQRNIASR LDAQGRPIPL IAETGGMNAM IVDSSALTEQ
VVVDVLASAF DSAGQRCSAL RVLCLQDEIA DHTLKMLRGA MAECRMGNPG RLTTDIGPVI
DSEAKANIER HIQTMRSKGR PVFQAVRENS EDAREWQSGT FVAPTLIELD DFAELQKEVF
GPVLHVVRYN RNQLPELIEQ INASGYGLTL GVHTRIDETI AQVTGSAHVG NLYVNRNMVG
AVVGVQPFGG EGLSGTGPKA GGPLYLYRLL ANRPESALAV TLARQDAKYP VDAQLKAALT
QPLNALREWA ANRPELQALC TQYGELAQAG TQRLLPGPTG ERNTWTLLPR ERVLCIADDE
QDALTQLAAV LAVGSQVLWP DDALHRQLVK ALPSAVSERI QLAKAENITA QPFDAVIFHG
DSDQLRALCE AVAARDGTIV SVQGFARGES NILLERLYIE RSLSVNTAAA GGNASLMTIG