Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2587 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 2759153 |
End bp | 2760271 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Sarcosine oxidase |
Protein accession | ACX40223 |
Protein GI | 260449801 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATACG ATCTCATCAT TATTGGCAGC GGTTCCGTAG GCGCTGCCGC CGGGTATTAT GCAACCCGCG CCGGTTTAAA CGTGCTAATG ACCGACGCCC ATATGCCACC GCATCAACAC GGCAGCCACC ACGGCGATAC GCGATTAATT CGCCATGCTT ATGGTGAAGG CGAAAAGTAT GTCCCGCTGG TCCTCCGCGC GCAAACGCTG TGGGATGAAC TCTCCCGCCA CAACGAAGAA GATCCCATTT TTGTACGCTC TGGCGTCATT AACCTTGGCC CGGCTGATTC CACATTTCTC GCCAACGTCG CCCACAGCGC CGAACAATGG CAACTCAACG TTGAAAAGCT CGATGCGCAA GGGATTATGG CCCGCTGGCC GGAAATACGC GTCCCGGACA ACTACATCGG CTTATTTGAA ACTGATTCCG GTTTTTTGCG CAGCGAACTG GCGATTAAAA CCTGGATCCA ACTGGCGAAG GAAGCGGGCT GTGCGCAACT GTTCAACTGC CCGGTCACCG CAATTCGTCA TGACGATGAT GGCGTAACTA TTGAAACGGC TGACGGTGAG TATCAGGCGA AAAAAGCGAT TGTCTGCGCG GGAACATGGG TAAAAGACCT GCTCCCGGAG CTGCCTGTCC AGCCCGTACG CAAAGTATTT GCCTGGTATC AGGCCGATGG CCGCTATAGC GTGAAGAATA AATTCCCGGC GTTTACCGGT GAACTGCCCA ATGGCGATCA ATATTATGGT TTTCCGGCAG AAAACGACGC GTTGAAGATT GGCAAACATA ACGGAGGCCA GGTTATCCAT TCAGCGGATG AACGTGTTCC GTTTGCGGAA GTGGCCAGTG ATGGGTCAGA AGCCTTCCCG TTCTTGCGCA ATGTATTGCC GGGTATCGGT TGCTGCCTGT ACGGCGCTGC CTGCACCTAT GATAATTCGC CTGACGAAGA TTTTATTATC GATACCCTAC CCGGCCACGA TAATACACTG CTCATTACCG GCCTGAGTGG GCACGGTTTT AAATTTGCGT CAGTTTTAGG GGAAATAGCT GCCGATTTTG CGCAAGACAA AAAAAGCGAT TTTGATTTGA CGCCATTCAG GCTTTCCCGC TTCCAATAA
|
Protein sequence | MKYDLIIIGS GSVGAAAGYY ATRAGLNVLM TDAHMPPHQH GSHHGDTRLI RHAYGEGEKY VPLVLRAQTL WDELSRHNEE DPIFVRSGVI NLGPADSTFL ANVAHSAEQW QLNVEKLDAQ GIMARWPEIR VPDNYIGLFE TDSGFLRSEL AIKTWIQLAK EAGCAQLFNC PVTAIRHDDD GVTIETADGE YQAKKAIVCA GTWVKDLLPE LPVQPVRKVF AWYQADGRYS VKNKFPAFTG ELPNGDQYYG FPAENDALKI GKHNGGQVIH SADERVPFAE VASDGSEAFP FLRNVLPGIG CCLYGAACTY DNSPDEDFII DTLPGHDNTL LITGLSGHGF KFASVLGEIA ADFAQDKKSD FDLTPFRLSR FQ
|
| |