Gene EcDH1_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2564 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2739718 
End bp2741361 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content52% 
IMG OID 
Productflagellar hook-associated protein FlgK 
Protein accessionACX40200 
Protein GI260449778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.141155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGCT TGATTAATAA CGCCATGAGC GGACTGAACG CGGCCCAGGC GGCGTTAAAT 
ACGGCAAGTA ATAATATCTC CAGCTATAAC GTTGCCGGAT ATACCCGCCA AACCACTATT
ATGGCGCAGG CCAATAGCAC GTTGGGCGCT GGCGGCTGGG TTGGCAATGG TGTCTACGTT
TCTGGTGTGC AGCGTGAGTA TGATGCGTTT ATTACCAACC AGTTACGTGC GGCGCAGACG
CAAAGTAGCG GTCTGACTGC CCGCTATGAG CAGATGTCGA AAATCGACAA TATGCTCTCC
ACCAGTACCT CTTCGCTGGC AACACAGATG CAGGATTTCT TCACCAGCCT GCAAACGCTG
GTGAGTAACG CGGAAGACCC GGCAGCGCGC CAGGCGCTGA TTGGGAAATC AGAAGGATTG
GTGAATCAGT TTAAAACCAC CGATCAATAT CTGCGCGACC AGGACAAACA GGTCAATATC
GCGATAGGTG CCAGCGTTGA TCAGATCAAC AACTACGCTA AACAAATTGC CAGCCTGAAC
GATCAAATCT CGCGCCTGAC AGGCGTGGGG GCAGGGGCGT CACCTAACAA TCTGCTGGAT
CAACGCGATC AACTGGTGAG CGAATTAAAC CAGATTGTTG GTGTAGAAGT CAGCGTTCAG
GATGGCGGCA CTTATAACAT CACGATGGCC AATGGTTACT CACTGGTTCA GGGAAGTACG
GCGCGGCAAC TGGCGGCAGT TCCTTCCAGC GCTGACCCTT CTCGTACGAC TGTCGCTTAT
GTTGATGGGA CGGCAGGCAA TATTGAGATC CCGGAGAAAT TACTGAATAC CGGGTCGCTG
GGCGGCATTC TGACATTCCG TTCTCAGGAT CTGGACCAGA CGCGTAATAC GCTTGGACAA
CTGGCGCTGG CATTTGCCGA GGCTTTCAAC ACCCAACACA AAGCCGGATT TGATGCTAAC
GGCGATGCCG GTGAAGATTT CTTTGCTATC GGTAAGCCCG CGGTTCTGCA AAACACGAAA
AACAAAGGTG ACGTTGCGAT CGGTGCCACG GTAACTGATG CCTCCGCGGT ACTGGCGACA
GATTACAAAA TCTCGTTCGA TAATAATCAG TGGCAGGTCA CCCGCCTTGC CAGCAATACC
ACTTTTACGG TGACGCCGGA TGCCAACGGT AAAGTGGCAT TTGATGGTCT GGAGTTGACG
TTTACAGGAA CGCCTGCCGT TAACGACAGC TTCACGCTGA AACCAGTAAG TGACGCCATC
GTCAACATGG ATGTATTAAT CACCGACGAA GCGAAAATAG CGATGGCGAG CGAAGAAGAT
GCGGGTGATA GCGATAACCG CAACGGTCAG GCCCTGCTGG ATCTGCAAAG CAACAGTAAA
ACGGTGGGCG GTGCGAAATC CTTTAACGAC GCTTATGCCT CGTTAGTGAG TGATATCGGT
AATAAAACCG CGACGTTGAA AACCAGTAGC GCCACGCAAG GTAATGTGGT GACGCAGCTT
TCCAATCAGC AGCAGTCGAT TTCCGGTGTC AATCTCGATG AGGAGTACGG AAATCTGCAA
CGTTTTCAGC AGTATTACCT GGCGAATGCG CAGGTTCTGC AGACGGCAAA CGCGATTTTT
GATGCGCTGA TTAACATTCG CTAA
 
Protein sequence
MSSLINNAMS GLNAAQAALN TASNNISSYN VAGYTRQTTI MAQANSTLGA GGWVGNGVYV 
SGVQREYDAF ITNQLRAAQT QSSGLTARYE QMSKIDNMLS TSTSSLATQM QDFFTSLQTL
VSNAEDPAAR QALIGKSEGL VNQFKTTDQY LRDQDKQVNI AIGASVDQIN NYAKQIASLN
DQISRLTGVG AGASPNNLLD QRDQLVSELN QIVGVEVSVQ DGGTYNITMA NGYSLVQGST
ARQLAAVPSS ADPSRTTVAY VDGTAGNIEI PEKLLNTGSL GGILTFRSQD LDQTRNTLGQ
LALAFAEAFN TQHKAGFDAN GDAGEDFFAI GKPAVLQNTK NKGDVAIGAT VTDASAVLAT
DYKISFDNNQ WQVTRLASNT TFTVTPDANG KVAFDGLELT FTGTPAVNDS FTLKPVSDAI
VNMDVLITDE AKIAMASEED AGDSDNRNGQ ALLDLQSNSK TVGGAKSFND AYASLVSDIG
NKTATLKTSS ATQGNVVTQL SNQQQSISGV NLDEEYGNLQ RFQQYYLANA QVLQTANAIF
DALINIR