| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2529 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2701175 |
|---|
| End bp | 2702413 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | lipoprotein releasing system, transmembrane protein LolE |
|---|
| Protein accession | ACX40165 |
|---|
| Protein GI | 260449743 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00000138294 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTAT CGTTATTAAT TGGCCTGCGT TTTAGTCGCG GACGGCGGCG CGGCGGCATG
GTGTCGCTGA TCTCCGTTAT TTCTACCATT GGCATTGCCC TCGGCGTGGC GGTATTGATC
GTCGGCTTAA GCGCGATGAA CGGCTTTGAA CGCGAACTGA ACAACCGTAT TCTGGCGGTG
GTGCCGCATG GTGAAATCGA GGCGGTGGAT CAGCCGTGGA CTAACTGGCA GGAAGCACTG
GATCACGTGC AAAAAGTGCC GGGTATTGCC GCTGCCGCGC CGTATATCAA TTTCACCGGG
CTGGTGGAAA GTGGCGCGAA TCTTCGCGCA ATCCAGGTGA AGGGCGTTAA CCCGCAACAG
GAACAGCGTC TGAGCGCATT ACCCTCGTTT GTCCAGGGCG ATGCGTGGCG CAATTTTAAA
GCGGGCGAAC AGCAAATTAT CATCGGCAAA GGCGTGGCGG ATGCGCTGAA AGTGAAGCAG
GGGGATTGGG TGTCGATTAT GATCCCCAAC TCGAATCCCG AGCATAAACT GATGCAGCCA
AAACGTGTGC GTTTGCACGT TGCCGGTATT TTGCAGTTGA GTGGTCAACT CGATCACAGT
TTTGCCATGA TCCCGCTGGC GGATGCCCAA CAATATCTTG ATATGGGTTC CAGCGTGTCA
GGTATTGCCC TTAAAATGAC GGATGTTTTC AACGCCAATA AGCTGGTACG CGATGCGGGT
GAAGTGACCA ACAGCTATGT TTATATTAAA AGCTGGATTG GTACTTACGG CTATATGTAT
CGCGATATCC AAATGATCCG CGCCATTATG TATCTGGCGA TGGTACTGGT GATTGGCGTG
GCCTGTTTCA ACATCGTCTC CACCTTAGTG ATGGCGGTGA AAGACAAGAG TGGCGATATC
GCAGTATTAA GAACGCTGGG GGCGAAAGAT GGTTTAATTC GCGCCATCTT TGTCTGGTAT
GGATTGCTGG CAGGGCTGTT CGGCAGCCTG TGTGGTGTGA TTATCGGCGT AGTGGTTTCA
CTGCAACTTA CCCCGATTAT TGAGTGGATT GAAAAGTTGA TCGGTCATCA GTTCCTCTCC
AGCGATATCT ATTTTATTGA TTTCCTGCCA TCGGAATTGC ACTGGCTGGA CGTCTTCTAC
GTACTGGTCA CAGCATTGTT GCTGAGTCTT TTGGCAAGTT GGTATCCGGC GCGGCGCGCC
AGTAATATTG ACCCTGCGCG AGTCCTTAGC GGCCAGTAA
|
|---|
| Protein sequence | MPLSLLIGLR FSRGRRRGGM VSLISVISTI GIALGVAVLI VGLSAMNGFE RELNNRILAV
VPHGEIEAVD QPWTNWQEAL DHVQKVPGIA AAAPYINFTG LVESGANLRA IQVKGVNPQQ
EQRLSALPSF VQGDAWRNFK AGEQQIIIGK GVADALKVKQ GDWVSIMIPN SNPEHKLMQP
KRVRLHVAGI LQLSGQLDHS FAMIPLADAQ QYLDMGSSVS GIALKMTDVF NANKLVRDAG
EVTNSYVYIK SWIGTYGYMY RDIQMIRAIM YLAMVLVIGV ACFNIVSTLV MAVKDKSGDI
AVLRTLGAKD GLIRAIFVWY GLLAGLFGSL CGVIIGVVVS LQLTPIIEWI EKLIGHQFLS
SDIYFIDFLP SELHWLDVFY VLVTALLLSL LASWYPARRA SNIDPARVLS GQ
|
|---|
| |