Gene EcDH1_2527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2527 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2699380 
End bp2700219 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content52% 
IMG OID 
ProductSilent information regulator protein Sir2 
Protein accessionACX40163 
Protein GI260449741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000048723 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTCGC GTCGGGGTCA TCGGTTAAGT CGTTTTCGTA AAAATAAACG CCGCCTGCGC 
GAGCGTTTGC GTCAGCGTAT TTTTTTCAGA GATAAAGTGG TGCCGGAAGC AATGGAAAAA
CCAAGAGTAC TCGTACTGAC AGGGGCAGGA ATTTCTGCGG AATCAGGTAT TCGTACCTTT
CGCGCCGCAG ATGGCCTGTG GGAAGAACAT CGGGTTGAAG ATGTGGCAAC GCCGGAAGGT
TTCGATCGCG ATCCTGAACT GGTGCAAGCG TTTTATAACG CCCGTCGTCG ACAGCTGCAG
CAGCCAGAAA TTCAGCCTAA CGCCGCGCAT CTTGCGCTGG CTAAACTGCA AGACGCCCTC
GGCGATCGCT TTTTGCTGGT GACGCAGAAT ATCGACAACC TGCATGAACG CGCAGGTAAT
ACCAATGTGA TTCATATGCA TGGGGAACTG CTGAAAGTGC GTTGTTCACA AAGTGGTCAG
GTTCTCGACT GGACAGGAGA CGTTACCCCA GAAGATAAAT GCCATTGTTG CCAGTTTCCG
GCACCCTTGC GCCCGCACGT AGTGTGGTTT GGCGAAATGC CACTCGGCAT GGATGAAATT
TATATGGCGT TGTCGATGGC CGATATTTTC ATTGCCATTG GCACATCCGG GCATGTTTAT
CCGGCGGCTG GGTTTGTTCA CGAAGCGAAA CTGCATGGCG CGCACACCGT GGAACTGAAT
CTTGAACCGA GTCAGGTTGG TAATGAATTT GCCGAGAAAT ATTACGGCCC GGCAAGCCAG
GTGGTGCCTG AGTTTGTTGA AAAGTTGCTG AAGGGATTAA AAGCGGGAAG CATTGCCTGA
 
Protein sequence
MLSRRGHRLS RFRKNKRRLR ERLRQRIFFR DKVVPEAMEK PRVLVLTGAG ISAESGIRTF 
RAADGLWEEH RVEDVATPEG FDRDPELVQA FYNARRRQLQ QPEIQPNAAH LALAKLQDAL
GDRFLLVTQN IDNLHERAGN TNVIHMHGEL LKVRCSQSGQ VLDWTGDVTP EDKCHCCQFP
APLRPHVVWF GEMPLGMDEI YMALSMADIF IAIGTSGHVY PAAGFVHEAK LHGAHTVELN
LEPSQVGNEF AEKYYGPASQ VVPEFVEKLL KGLKAGSIA