Gene EcDH1_2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2524 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2696910 
End bp2697956 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content51% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionACX40160 
Protein GI260449738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00059946 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT GGTCACGCCA CCTGCTCGCG GCGGGTGCTC TGGCACTGGG CATGAGCGCC 
GCTCACGCCG ATGACAACAA CACGCTGTAT TTCTACAACT GGACCGAGTA CGTGCCGCCA
GGACTGCTTG AACAGTTCAC CAAAGAAACC GGTATTAAGG TTATCTATTC GACTTACGAG
TCGAACGAAA CCATGTACGC CAAGCTGAAA ACATACAAAG ACGGTGCCTA TGATCTGGTG
GTTCCTTCAA CCTATTACGT TGATAAAATG CGTAAAGAAG GGATGATCCA GAAGATCGAC
AAGTCGAAGT TAACAAACTT CAGCAATCTC GATCCAGACA TGCTCAACAA GCCTTTTGAC
CCGAATAACG ACTACTCCAT TCCGTATATC TGGGGTGCGA CGGCGATTGG TGTTAACGGT
GATGCGGTGG ATCCGAAATC TGTCACCAGC TGGGCCGATC TGTGGAAGCC AGAGTACAAA
GGCAGCCTGC TGTTGACCGA CGATGCCCGT GAAGTGTTCC AGATGGCGCT GCGTAAGCTG
GGCTACTCCG GTAACACCAC CGATCCGAAA GAGATTGAAG CTGCATATAA CGAGCTGAAA
AAACTGATGC CAAACGTGGC AGCCTTTAAC TCCGATAACC CGGCGAACCC GTACATGGAA
GGCGAAGTTA ACCTCGGCAT GATCTGGAAC GGTTCTGCTT TCGTTGCACG CCAGGCGGGT
ACGCCAATTG ACGTGGTGTG GCCGAAAGAA GGCGGCATTT TCTGGATGGA CAGCCTGGCG
ATCCCGGCAA ATGCCAAAAA CAAAGAAGGC GCGCTGAAAT TGATCAACTT CCTGCTGCGC
CCGGATGTGG CAAAACAGGT TGCTGAAACT ATCGGTTATC CAACGCCAAA CCTTGCGGCG
CGTAAGCTGT TAAGTCCAGA AGTGGCGAAC GATAAAACAC TCTACCCGGA TGCTGAAACC
ATTAAAAATG GCGAATGGCA GAATGACGTT GGCGCAGCCA GCAGCATTTA TGAAGAGTAT
TATCAGAAGC TGAAAGCAGG ACGTTAA
 
Protein sequence
MKKWSRHLLA AGALALGMSA AHADDNNTLY FYNWTEYVPP GLLEQFTKET GIKVIYSTYE 
SNETMYAKLK TYKDGAYDLV VPSTYYVDKM RKEGMIQKID KSKLTNFSNL DPDMLNKPFD
PNNDYSIPYI WGATAIGVNG DAVDPKSVTS WADLWKPEYK GSLLLTDDAR EVFQMALRKL
GYSGNTTDPK EIEAAYNELK KLMPNVAAFN SDNPANPYME GEVNLGMIWN GSAFVARQAG
TPIDVVWPKE GGIFWMDSLA IPANAKNKEG ALKLINFLLR PDVAKQVAET IGYPTPNLAA
RKLLSPEVAN DKTLYPDAET IKNGEWQNDV GAASSIYEEY YQKLKAGR