| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2522 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 2695265 |
|---|
| End bp | 2696122 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | ACX40158 |
|---|
| Protein GI | 260449736 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.000172169 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACA CAAGTAAGTT CCAGAATGTA GTGATTGTCA CTATTGTCGG TTGGCTTGTG
TTGTTTGTCT TTCTGCCCAA CCTGATGATC ATTGGCACCA GCTTTTTGAC CCGCGACGAC
GCCAGTTTTG TCAAAATGGT CTTTACGCTG GATAACTACA CGCGTCTGCT CGATCCGCTC
TATTTTGAAG TGCTATTGCA CTCGCTGAAT ATGGCGCTGA TCGCCACCCT CGCCTGCCTG
GTGCTGGGCT ACCCGTTTGC CTGGTTTCTG GCGAAGTTGC CACACAAGGT GCGTCCGCTG
CTGCTGTTTC TGCTGATTGT TCCGTTCTGG ACCAACTCAT TAATTCGTAT CTACGGGCTG
AAAATTTTCC TCAGCACCAA AGGCTATCTC AACGAGTTTT TGCTCTGGCT GGGCGTTATC
GACACACCAA TCCGTATCAT GTTCACGCCC AGTGCGGTGA TTATCGGTCT GGTTTACATT
CTGCTGCCGT TTATGGTGAT GCCGCTGTAC TCCAGTATCG AAAAACTGGA TAAGCCGTTG
CTTGAGGCGG CGCGCGATCT CGGTGCCAGC AAGTTACAGA CTTTTATCCG TATCATTATT
CCACTGACGA TGCCGGGAAT TATTGCCGGA TGTCTGCTGG TGATGCTGCC AGCGATGGGC
CTGTTCTATG TATCCGACCT GATGGGCGGT GCGAAAAACC TGCTGATCGG TAACGTCATC
AAGGTCCAGT TCCTTAATAT TCGTGACTGG CCGTTTGGTG CAGCTACCAG CATTACGCTG
ACTATCGTAA TGGGCCTGAT GTTGCTGGTT TACTGGCGCG CTTCTCGTTT GCTGAATAAG
AAGGTGGAAC TCGAATGA
|
|---|
| Protein sequence | MKNTSKFQNV VIVTIVGWLV LFVFLPNLMI IGTSFLTRDD ASFVKMVFTL DNYTRLLDPL
YFEVLLHSLN MALIATLACL VLGYPFAWFL AKLPHKVRPL LLFLLIVPFW TNSLIRIYGL
KIFLSTKGYL NEFLLWLGVI DTPIRIMFTP SAVIIGLVYI LLPFMVMPLY SSIEKLDKPL
LEAARDLGAS KLQTFIRIII PLTMPGIIAG CLLVMLPAMG LFYVSDLMGG AKNLLIGNVI
KVQFLNIRDW PFGAATSITL TIVMGLMLLV YWRASRLLNK KVELE
|
|---|
| |