| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2520 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2692669 |
|---|
| End bp | 2693895 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | peptidase T |
|---|
| Protein accession | ACX40156 |
|---|
| Protein GI | 260449734 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00630559 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAC TACTTGAGCG ATTTTTGAAC TACGTGTCTC TGGATACCCA ATCAAAAGCA
GGGGTGAGAC AGGTTCCCAG CACGGAAGGC CAATGGAAGT TATTGCATCT GCTGAAAGAG
CAGCTCGAAG AGATGGGGCT TATCAATGTG ACCTTAAGTG AGAAGGGCAC TTTGATGGCG
ACGTTACCGG CTAACGTCCC TGGCGATATC CCGGCGATTG GCTTTATTTC TCATGTGGAT
ACCTCACCGG ATTGCAGCGG CAAAAATGTG AATCCGCAAA TTGTTGAAAA CTATCGCGGT
GGCGATATTG CGCTGGGTAT CGGCGATGAA GTTTTATCAC CGGTTATGTT CCCGGTGCTG
CATCAGCTAC TGGGTCAGAC GCTGATTACC ACCGATGGTA AAACCTTGTT AGGTGCCGAT
GACAAAGCAG GTATTGCAGA AATCATGACC GCGCTGGCGG TATTGCAACA GAAAAAAATT
CCGCATGGTG ATATTCGCGT CGCCTTTACC CCGGATGAAG AAGTGGGCAA AGGGGCGAAA
CATTTTGATG TTGACGCCTT CGATGCCCGC TGGGCTTACA CTGTTGATGG TGGTGGCGTA
GGCGAACTGG AGTTTGAAAA CTTCAACGCC GCGTCGGTCA ATATCAAAAT TGTCGGTAAC
AATGTTCATC CGGGCACGGC GAAAGGAGTG ATGGTAAATG CGCTGTCGCT GGCGGCACGT
ATTCATGCGG AAGTTCCGGC GGATGAAAGC CCGGAAATGA CAGAAGGCTA TGAAGGTTTC
TATCATCTGG CGAGCATGAA AGGCACCGTT GAACGGGCCG ATATGCACTA CATCATCCGT
GATTTCGACC GTAAACAGTT TGAAGCGCGT AAACGTAAAA TGATGGAGAT CGCCAAAAAA
GTGGGCAAAG GGTTACATCC TGATTGCTAC ATTGAACTGG TGATTGAAGA CAGTTACTAC
AATATGCGCG AGAAAGTGGT TGAGCATCCG CATATTCTCG ATATCGCCCA GCAGGCGATG
CGCGATTGCG ATATTGAACC GGAACTGAAA CCGATCCGCG GTGGTACCGA CGGCGCGCAG
TTGTCGTTTA TGGGATTACC GTGCCCGAAC CTGTTCACTG GCGGTTACAA CTATCATGGT
AAGCATGAGT TTGTGACTCT GGAAGGTATG GAAAAAGCGG TGCAGGTGAT CGTCCGTATT
GCCGAGTTAA CGGCGCAACG GAAGTAA
|
|---|
| Protein sequence | MDKLLERFLN YVSLDTQSKA GVRQVPSTEG QWKLLHLLKE QLEEMGLINV TLSEKGTLMA
TLPANVPGDI PAIGFISHVD TSPDCSGKNV NPQIVENYRG GDIALGIGDE VLSPVMFPVL
HQLLGQTLIT TDGKTLLGAD DKAGIAEIMT ALAVLQQKKI PHGDIRVAFT PDEEVGKGAK
HFDVDAFDAR WAYTVDGGGV GELEFENFNA ASVNIKIVGN NVHPGTAKGV MVNALSLAAR
IHAEVPADES PEMTEGYEGF YHLASMKGTV ERADMHYIIR DFDRKQFEAR KRKMMEIAKK
VGKGLHPDCY IELVIEDSYY NMREKVVEHP HILDIAQQAM RDCDIEPELK PIRGGTDGAQ
LSFMGLPCPN LFTGGYNYHG KHEFVTLEGM EKAVQVIVRI AELTAQRK
|
|---|
| |