| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2492 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2670189 |
|---|
| End bp | 2670977 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | Tail Collar domain protein |
|---|
| Protein accession | ACX40129 |
|---|
| Protein GI | 260449707 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.136013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGTA TAGACACGAA AACCGCGCAG AAGGATAAGT TCGGCGCGGG TAAGAACGGT
TTTACCCGTG GTAACCCCCA GACCGGCACG CCTGCCACCG ATCTGGATGA TGACTACTTT
GACATGTTGC AGGAGGAACT TTGCAGCGTG GTGGAGGCAT CCGGTGCCAG CCTGGAGAAG
GGGCGGCACG ACCAGTTACT TACCGCACTT CGCGCGCTGC TGTTAAGCCG CAAGAATCCG
TTTGGCGATA TCAAATCGGA TGGCACTGTG CAAACGGCTC TCGAAAACCT TGGTTTGGGA
GAAGGCTCTG CATTACCTGT TGGTGTCCCG GTTCCGTGGC CTTCAGCCAC TCCGCCAACA
GGCTGGCTGA AATGCAATGG TGCCGCTTTT TCTGCTGAAG AATACCCGGA ACTGGCAAAG
GCTTATCCGA CAAATAAATT GCCTGATTTA CGTGGTGAGT TTATTCGTGG CTGGGATGAC
GGGCGGGGGA TTGATACAGG TCGCTCTATT TTAAGTATTC AGGGGTATGC AACGGAGGAT
CATGCTCATG GATTACCGTC AAGATCCACG ATTGTGACTG ATGCAACGAT TAATTTCTAT
TTTGATGAAA TATGGGTAAA TAGTGGCACT GACATTATCA AAAGAGGAAA CACAAACGAT
GCCGGATTAC CAGCCCCGGA TTATGGAACC TTTAAAACAT ATAAACAATC AGTGGATGGT
TTAGGTGCCG CAGCCTCAGA AACGCGTCCG CGTAATATTG CATTTAACTA TATCGTGAGG
GCAGCCTGA
|
|---|
| Protein sequence | MHRIDTKTAQ KDKFGAGKNG FTRGNPQTGT PATDLDDDYF DMLQEELCSV VEASGASLEK
GRHDQLLTAL RALLLSRKNP FGDIKSDGTV QTALENLGLG EGSALPVGVP VPWPSATPPT
GWLKCNGAAF SAEEYPELAK AYPTNKLPDL RGEFIRGWDD GRGIDTGRSI LSIQGYATED
HAHGLPSRST IVTDATINFY FDEIWVNSGT DIIKRGNTND AGLPAPDYGT FKTYKQSVDG
LGAAASETRP RNIAFNYIVR AA
|
|---|
| |