| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2458 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2638529 |
|---|
| End bp | 2639599 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | alanine racemase |
|---|
| Protein accession | ACX40098 |
|---|
| Protein GI | 260449676 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000000612069 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTC CGATACAGGC CAGCCTCGAT CTGCAGGCAT TAAAACAGAA TCTGTCCATT
GTCCGCCAGG CCGCGACGCA CGCGCGCGTC TGGTCGGTGG TAAAAGCGAA CGCTTACGGG
CATGGTATTG AGCGTATCTG GAGCGCGATC GGGGCCACCG ATGGCTTTGC ATTGCTTAAC
CTGGAAGAGG CAATAACGTT ACGTGAGCGC GGCTGGAAAG GACCGATCCT GATGCTGGAA
GGATTTTTCC ATGCTCAGGA TCTGGAGATT TATGACCAGC ACCGCCTGAC CACCTGCGTA
CACAGCAACT GGCAGCTCAA AGCACTGCAA AATGCGCGGC TAAAAGCACC GTTGGATATT
TATCTTAAAG TGAACAGTGG GATGAATCGG TTGGGCTTCC AGCCCGATCG CGTGCTTACC
GTCTGGCAGC AGTTGCGGGC AATGGCGAAT GTTGGCGAAA TGACCCTGAT GTCGCATTTT
GCCGAAGCGG AACATCCTGA TGGAATTTCC GGCGCGATGG CGCGTATTGA GCAGGCGGCG
GAGGGGCTGG AGTGTCGGCG TTCGTTGTCC AATTCGGCGG CGACTCTGTG GCACCCGGAA
GCGCATTTTG ACTGGGTTCG GCCTGGCATT ATTTTGTATG GCGCTTCGCC GTCCGGTCAG
TGGCGTGATA TCGCCAATAC CGGATTACGT CCGGTGATGA CGCTAAGCAG TGAGATTATT
GGTGTCCAGA CGCTAAAAGC GGGCGAGCGT GTGGGCTACG GCGGTCGCTA TACTGCGCGC
GATGAACAGC GAATCGGCAT TGTCGCCGCA GGGTACGCCG ACGGTTATCC GCGCCACGCG
CCTACCGGTA CCCCTGTTTT AGTGGACGGC GTGCGCACCA TGACGGTGGG GACCGTCTCG
ATGGATATGC TAGCGGTCGA TTTAACGCCT TGCCCGCAGG CGGGTATTGG TACGCCGGTT
GAGCTGTGGG GCAAGGAGAT CAAAATTGAT GATGTCGCCG CCGCTGCCGG AACGGTGGGC
TATGAGTTGA TGTGCGCGCT GGCGCTACGC GTCCCGGTTG TGACGGTGTA A
|
|---|
| Protein sequence | MTRPIQASLD LQALKQNLSI VRQAATHARV WSVVKANAYG HGIERIWSAI GATDGFALLN
LEEAITLRER GWKGPILMLE GFFHAQDLEI YDQHRLTTCV HSNWQLKALQ NARLKAPLDI
YLKVNSGMNR LGFQPDRVLT VWQQLRAMAN VGEMTLMSHF AEAEHPDGIS GAMARIEQAA
EGLECRRSLS NSAATLWHPE AHFDWVRPGI ILYGASPSGQ WRDIANTGLR PVMTLSSEII
GVQTLKAGER VGYGGRYTAR DEQRIGIVAA GYADGYPRHA PTGTPVLVDG VRTMTVGTVS
MDMLAVDLTP CPQAGIGTPV ELWGKEIKID DVAAAAGTVG YELMCALALR VPVVTV
|
|---|
| |